Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OMOGLBIO_139 | 120969 | 120775 | CspA | 7.53e-28 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OMOGLBIO_10 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_21 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_32 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_43 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_54 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_65 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_76 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_87 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_98 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_109 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_110 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_119 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_120 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_121 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_122 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_123 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_124 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_125 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_126 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_127 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_128 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_129 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_130 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_131 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_132 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_133 | 1.0 | 0.0 | 1.0 |
| OMOGLBIO_135 | 1.0 | 0.0 | 1.0 |
| OMOGLBIO_136 | 1.0 | 0.0 | 1.0 |
| OMOGLBIO_138 | 1.0 | 0.0 | 1.0 |
| OMOGLBIO_139 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_140 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_143 | 1.0 | 0.0 | 1.0 |
| OMOGLBIO_150 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_161 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_172 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_183 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_194 | 0.0 | 1.0 | 0.0 |
| OMOGLBIO_205 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OMOGLBIO_110 | 277929 | 301811 | False | Siphoviridae | VOG0198, VOG10604, VOG0866, VOG4841, VOG4581, VOG4544, VOG4556, VOG4568, VOG4553, VOG0204, VOG4589, VOG0539, VOG0704, VOG4586, VOG2225, VOG9471, VOG6163, VOG0801, VOG3462, VOG5008 |
| OMOGLBIO_172 | 82208 | 87909 | False | Unknown | VOG0052, VOG4564, VOG0226, VOG10104 |
Phigaro v2.4.0 (Database: Jan. 2024 release)