Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CFEINHNO_57 | 133060 | 133764 | WalR | 2.58e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| CFEINHNO_14 | 33517 | 33320 | CspR | 3.62e-33 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CFEINHNO_1 | 1.0 | 0.0 | 1.0 |
| CFEINHNO_2 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_3 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_4 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_5 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_6 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_7 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_8 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_9 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_10 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_11 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_12 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_13 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_14 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_15 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_16 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_17 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_18 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_19 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_20 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_21 | 1.0 | 0.0 | 1.0 |
| CFEINHNO_22 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_23 | 1.0 | 0.0 | 1.0 |
| CFEINHNO_24 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_25 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_26 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_27 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_28 | 1.0 | 0.0 | 1.0 |
| CFEINHNO_29 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_30 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_31 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_32 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_34 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_35 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_36 | 1.0 | 0.0 | 1.0 |
| CFEINHNO_37 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_38 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_39 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_40 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_41 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_42 | 1.0 | 0.0 | 1.0 |
| CFEINHNO_43 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_44 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_45 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_46 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_47 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_48 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_49 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_50 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_51 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_52 | 1.0 | 0.0 | 1.0 |
| CFEINHNO_53 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_54 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_55 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_56 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_57 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_58 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_59 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_60 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_61 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_63 | 1.0 | 0.0 | 1.0 |
| CFEINHNO_64 | 1.0 | 0.0 | 1.0 |
| CFEINHNO_65 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_66 | 1.0 | 0.0 | 1.0 |
| CFEINHNO_67 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_68 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_69 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_70 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_71 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_72 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_73 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_74 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_75 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_76 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_77 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_78 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_79 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_80 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_81 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_82 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_83 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_84 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_85 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_86 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_87 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_88 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_89 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_90 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_91 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_92 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_93 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_94 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_95 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_96 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_97 | 0.0 | 1.0 | 0.0 |
| CFEINHNO_98 | 1.0 | 0.0 | 1.0 |
| CFEINHNO_99 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CFEINHNO_19 | 1258 | 25912 | False | Siphoviridae | VOG4549, VOG3699, VOG10227, VOG0720, VOG4564, VOG4555, VOG0694, VOG1322, VOG4713, VOG1320, VOG9583, VOG1321, VOG0799, VOG0725, VOG1323, VOG0801, VOG4619, VOG4683, VOG0861, VOG7017, VOG0602, VOG0638, VOG4649, VOG9287 |
| CFEINHNO_38 | 54 | 23857 | False | Siphoviridae | VOG4570, VOG4549, VOG1345, VOG4841, VOG4581, VOG4544, VOG3644, VOG4556, VOG4568, VOG4553, VOG10303, VOG0204, VOG4589, VOG0539, VOG0704, VOG4586, VOG2225, VOG4605, VOG4599, VOG4705, VOG7888, VOG0054, VOG4918 |
| CFEINHNO_57 | 79691 | 90820 | False | Siphoviridae | VOG10397, VOG1581, VOG4632, VOG4606, VOG0205, VOG4841, VOG4581, VOG4544, VOG5051, VOG4556, VOG4568, VOG0204 |
Phigaro v2.4.0 (Database: Jan. 2024 release)