Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FHPFLCOK_5 | 74190 | 73486 | WalR | 1.74e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| FHPFLCOK_1 | 175210 | 175013 | CspR | 1.15e-32 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FHPFLCOK_1 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_2 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_3 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_4 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_5 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_6 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_7 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_8 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_9 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_10 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_11 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_12 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_13 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_14 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_15 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_16 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_17 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_18 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_19 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_20 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_21 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_22 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_23 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_24 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_25 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_26 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_27 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_28 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_29 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_30 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_31 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_32 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_33 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_34 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_35 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_36 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_37 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_38 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_39 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_40 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_41 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_42 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_43 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_44 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_45 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_46 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_47 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_48 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_49 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_50 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_51 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_52 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_53 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_54 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_55 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_56 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_57 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_58 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_59 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_60 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_61 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_62 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_63 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_64 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_65 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_66 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_67 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_68 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_69 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_70 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_71 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_72 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_73 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_74 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_75 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_76 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_77 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_78 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_79 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_80 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_81 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_82 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_83 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_84 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_85 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_86 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_87 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_88 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_89 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_90 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_91 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_92 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_93 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_94 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_95 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_96 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_98 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_99 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_100 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_101 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_102 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_103 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_104 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_105 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_106 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_107 | 0.0 | 1.0 | 0.0 |
| FHPFLCOK_108 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_109 | 1.0 | 0.0 | 1.0 |
| FHPFLCOK_110 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FHPFLCOK_12 | 18397 | 48877 | False | Siphoviridae | VOG4649, VOG0054, VOG1637, VOG4660, VOG4828, VOG4633, VOG6163, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG5601, VOG4553, VOG4568, VOG4556, VOG3644, VOG4544, VOG4581, VOG4841, VOG4549, VOG0198, VOG2820, VOG9759, VOG0327 |
Phigaro v2.4.0 (Database: Jan. 2024 release)