Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MCHFKJKJ_2 | 317834 | 317130 | WalR | 2.73e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| MCHFKJKJ_40 | 3799 | 3996 | CspR | 1.43e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MCHFKJKJ_1 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_2 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_3 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_4 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_5 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_6 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_7 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_8 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_9 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_10 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_11 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_12 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_13 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_14 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_15 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_16 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_17 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_18 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_19 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_20 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_21 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_22 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_23 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_24 | 1.0 | 0.0 | 1.0 |
| MCHFKJKJ_25 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_26 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_27 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_28 | 1.0 | 0.0 | 1.0 |
| MCHFKJKJ_29 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_30 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_31 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_32 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_33 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_34 | 1.0 | 0.0 | 1.0 |
| MCHFKJKJ_35 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_36 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_37 | 1.0 | 0.0 | 1.0 |
| MCHFKJKJ_38 | 1.0 | 0.0 | 1.0 |
| MCHFKJKJ_39 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_40 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_41 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_42 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_43 | 1.0 | 0.0 | 1.0 |
| MCHFKJKJ_44 | 1.0 | 0.0 | 1.0 |
| MCHFKJKJ_45 | 1.0 | 0.0 | 1.0 |
| MCHFKJKJ_46 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_47 | 1.0 | 0.0 | 1.0 |
| MCHFKJKJ_48 | 1.0 | 0.0 | 1.0 |
| MCHFKJKJ_49 | 1.0 | 0.0 | 1.0 |
| MCHFKJKJ_50 | 1.0 | 0.0 | 1.0 |
| MCHFKJKJ_51 | 1.0 | 0.0 | 1.0 |
| MCHFKJKJ_52 | 1.0 | 0.0 | 1.0 |
| MCHFKJKJ_53 | 1.0 | 0.0 | 1.0 |
| MCHFKJKJ_54 | 1.0 | 0.0 | 1.0 |
| MCHFKJKJ_55 | 1.0 | 0.0 | 1.0 |
| MCHFKJKJ_56 | 1.0 | 0.0 | 1.0 |
| MCHFKJKJ_57 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_58 | 1.0 | 0.0 | 1.0 |
| MCHFKJKJ_59 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_60 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_61 | 1.0 | 0.0 | 1.0 |
| MCHFKJKJ_62 | 0.0 | 1.0 | 0.0 |
| MCHFKJKJ_63 | 1.0 | 0.0 | 1.0 |
| MCHFKJKJ_66 | 1.0 | 0.0 | 1.0 |
| MCHFKJKJ_67 | 1.0 | 0.0 | 1.0 |
| MCHFKJKJ_69 | 1.0 | 0.0 | 1.0 |
| MCHFKJKJ_70 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MCHFKJKJ_12 | 69435 | 75740 | False | Unknown | VOG2338, VOG0535, VOG0322, VOG0226, VOG4855, VOG0189, VOG7018, VOG9860 |
| MCHFKJKJ_17 | 51281 | 60877 | False | Siphoviridae | VOG4589, VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4609, VOG4632, VOG1581 |
| MCHFKJKJ_22 | 4756 | 10485 | True | Unknown | VOG3307, VOG0198, VOG5088, VOG5088 |
| MCHFKJKJ_23 | 12829 | 37297 | False | Siphoviridae | VOG0861, VOG4705, VOG4025, VOG4683, VOG4828, VOG4633, VOG0083, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG10868, VOG4553, VOG4568, VOG4556, VOG3644, VOG4544, VOG4581, VOG4841, VOG0531, VOG4549, VOG10904 |
Phigaro v2.4.0 (Database: Jan. 2024 release)