Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MILOBOJJ_30 | 7745 | 7041 | WalR | 2.19e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| MILOBOJJ_49 | 16149 | 16346 | CspR | 2.35e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| MILOBOJJ_42 | 1418 | 2476 | repUS75 | 1059 / 1059 | 100.00 | CP002393 |
| MILOBOJJ_27 | 19926 | 20986 | repUS73 | 1061 / 1101 | 96.23 | CP002654 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MILOBOJJ_1 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_2 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_3 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_4 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_5 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_6 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_7 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_8 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_9 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_10 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_11 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_12 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_13 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_14 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_15 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_16 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_17 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_18 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_19 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_20 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_21 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_22 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_23 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_24 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_25 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_26 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_27 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_28 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_29 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_30 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_31 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_32 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_33 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_34 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_35 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_36 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_37 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_38 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_39 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_40 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_41 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_42 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_43 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_44 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_45 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_46 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_47 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_48 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_49 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_50 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_51 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_52 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_53 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_54 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_55 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_56 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_57 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_58 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_59 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_60 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_61 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_62 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_63 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_64 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_65 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_66 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_67 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_68 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_69 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_70 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_71 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_72 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_73 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_74 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_75 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_76 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_77 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_78 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_79 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_80 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_81 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_82 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_83 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_84 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_85 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_86 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_87 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_88 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_89 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_90 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_91 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_92 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_93 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_94 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_95 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_96 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_97 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_98 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_99 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_100 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_101 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_102 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_103 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_104 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_105 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_106 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_107 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_108 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_109 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_110 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_111 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_112 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_113 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_114 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_115 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_116 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_117 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_118 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_119 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_120 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_121 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_122 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_123 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_124 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_125 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_126 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_127 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_128 | 0.0 | 1.0 | 0.0 |
| MILOBOJJ_129 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_130 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_132 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_133 | 1.0 | 0.0 | 1.0 |
| MILOBOJJ_134 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MILOBOJJ_1 | 3 | 34625 | False | Siphoviridae | VOG4599, VOG4605, VOG6163, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG10303, VOG4553, VOG4568, VOG4556, VOG3644, VOG4544, VOG4581, VOG4841, VOG0531, VOG4549, VOG10904, VOG4570, VOG4683, VOG0198, VOG3307, VOG0044, VOG3643, VOG2820, VOG4567, VOG9741, VOG4693, VOG7735, VOG0025, VOG4799, VOG10867, VOG0181, VOG4552, VOG3622, VOG9667, VOG3304, VOG6914 |
| MILOBOJJ_2 | 20164 | 50505 | False | Siphoviridae | VOG0862, VOG5353, VOG4552, VOG0181, VOG10867, VOG4600, VOG1309, VOG11003, VOG4566, VOG0189, VOG9082, VOG5998, VOG5562, VOG4693, VOG0744, VOG4673, VOG4841, VOG0519, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG1898, VOG4545, VOG4633, VOG4763, VOG3498, VOG0648, VOG1637, VOG0054, VOG0703 |
| MILOBOJJ_16 | 44710 | 55224 | False | Siphoviridae | VOG4589, VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4609, VOG4632 |
| MILOBOJJ_41 | 5804 | 15740 | False | Siphoviridae | VOG1309, VOG0186, VOG4855, VOG0189, VOG4688, VOG6623, VOG4693, VOG9741, VOG2820, VOG3643, VOG0044, VOG3307, VOG0198 |
Phigaro v2.4.0 (Database: Jan. 2024 release)