Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MDEPDEKP_48 | 6242 | 5538 | WalR | 1.31e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| MDEPDEKP_29 | 10661 | 10858 | CspR | 1.09e-33 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| MDEPDEKP_69 | 3822 | 4880 | repUS75 | 1059 / 1059 | 99.91 | CP002393 |
| MDEPDEKP_39 | 18780 | 19350 | rep38 | 576 / 903 | 89.93 | CP005943 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MDEPDEKP_1 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_2 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_3 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_4 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_5 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_6 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_7 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_8 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_9 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_10 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_11 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_12 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_13 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_14 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_15 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_16 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_17 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_18 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_19 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_20 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_21 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_22 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_23 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_24 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_25 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_26 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_27 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_28 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_29 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_30 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_31 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_32 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_33 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_34 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_35 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_36 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_37 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_38 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_39 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_40 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_41 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_42 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_43 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_44 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_45 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_46 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_47 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_48 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_49 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_50 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_51 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_52 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_53 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_54 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_55 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_56 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_57 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_58 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_59 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_60 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_61 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_62 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_63 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_64 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_65 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_66 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_67 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_68 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_69 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_70 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_71 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_72 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_73 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_74 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_75 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_76 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_77 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_78 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_79 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_80 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_81 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_82 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_83 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_84 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_85 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_86 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_87 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_88 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_89 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_90 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_91 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_92 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_93 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_94 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_95 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_96 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_97 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_98 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_99 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_100 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_101 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_102 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_103 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_104 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_105 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_106 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_107 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_108 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_109 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_110 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_111 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_112 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_113 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_114 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_116 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_117 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_118 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_119 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_120 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_121 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_122 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_123 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_124 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_125 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_126 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_127 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_128 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_129 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_130 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_131 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_132 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_133 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_134 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_135 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_136 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_137 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_138 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_139 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_142 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_143 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_144 | 0.0 | 1.0 | 0.0 |
| MDEPDEKP_146 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_147 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_148 | 1.0 | 0.0 | 1.0 |
| MDEPDEKP_149 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MDEPDEKP_6 | 5834 | 45326 | False | Siphoviridae | VOG1993, VOG8492, VOG0862, VOG8520, VOG5353, VOG0373, VOG10059, VOG9748, VOG0181, VOG3642, VOG4799, VOG0025, VOG7735, VOG7018, VOG0536, VOG9741, VOG4237, VOG0152, VOG3643, VOG0044, VOG1563, VOG0198, VOG4570, VOG10904, VOG4549, VOG6947, VOG1345, VOG4841, VOG4581, VOG4544, VOG3644, VOG4556, VOG4568, VOG4553, VOG0204, VOG4589, VOG0539, VOG0704, VOG4586, VOG2225, VOG0083, VOG6163, VOG4605, VOG4599, VOG6455, VOG7896, VOG0861, VOG7017, VOG0703 |
| MDEPDEKP_37 | 1165 | 21799 | False | Siphoviridae | VOG0602, VOG7017, VOG7896, VOG6455, VOG4599, VOG4605, VOG6163, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1322, VOG1887, VOG3434, VOG4555, VOG1183, VOG1300, VOG4564, VOG4564, VOG0720, VOG4544, VOG3699 |
Phigaro v2.4.0 (Database: Jan. 2024 release)