Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NJMCIAIC_10 | 52960 | 53664 | WalR | 1.07e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| NJMCIAIC_11 | 46614 | 46811 | CspR | 3.95e-33 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NJMCIAIC_1 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_2 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_3 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_4 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_5 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_6 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_7 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_8 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_9 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_10 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_11 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_12 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_13 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_14 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_15 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_16 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_17 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_18 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_19 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_20 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_21 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_22 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_23 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_24 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_25 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_26 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_27 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_28 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_29 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_30 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_31 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_32 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_33 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_34 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_35 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_36 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_37 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_38 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_39 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_40 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_41 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_42 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_43 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_44 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_45 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_46 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_47 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_48 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_49 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_50 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_51 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_52 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_53 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_54 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_55 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_56 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_57 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_58 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_59 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_60 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_61 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_62 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_63 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_64 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_65 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_66 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_67 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_68 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_69 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_70 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_71 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_72 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_73 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_74 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_75 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_76 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_77 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_78 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_79 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_80 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_81 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_82 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_83 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_84 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_85 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_86 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_89 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_90 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_91 | 0.0 | 1.0 | 0.0 |
| NJMCIAIC_93 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_94 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_95 | 1.0 | 0.0 | 1.0 |
| NJMCIAIC_96 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NJMCIAIC_6 | 64819 | 75508 | False | Siphoviridae | VOG4589, VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4606, VOG4632, VOG1581 |
Phigaro v2.4.0 (Database: Jan. 2024 release)