Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NMOJHIAC_17 | 25178 | 25882 | WalR | 2.99e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| NMOJHIAC_32 | 14843 | 15040 | CspR | 3.74e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| NMOJHIAC_29 | 7075 | 8136 | repUS74 | 1062 / 1062 | 99.81 | CP000424 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NMOJHIAC_1 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_2 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_3 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_4 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_5 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_6 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_7 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_8 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_9 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_10 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_11 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_12 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_13 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_14 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_15 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_16 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_17 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_18 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_19 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_20 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_21 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_22 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_23 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_24 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_25 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_26 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_27 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_28 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_29 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_30 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_31 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_32 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_33 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_34 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_35 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_36 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_37 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_38 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_39 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_40 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_41 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_42 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_43 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_44 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_45 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_46 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_47 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_48 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_49 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_50 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_51 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_52 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_53 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_54 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_55 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_56 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_57 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_58 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_59 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_60 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_61 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_62 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_63 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_64 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_65 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_66 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_67 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_68 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_69 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_70 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_71 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_72 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_73 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_74 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_75 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_76 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_77 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_78 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_79 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_80 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_81 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_82 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_83 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_84 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_85 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_86 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_87 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_88 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_89 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_90 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_91 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_92 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_93 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_94 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_95 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_96 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_97 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_98 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_99 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_100 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_101 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_102 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_103 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_104 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_105 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_106 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_107 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_108 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_109 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_110 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_111 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_112 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_113 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_114 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_115 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_116 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_117 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_118 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_119 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_120 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_121 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_122 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_123 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_124 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_125 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_127 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_129 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_130 | 0.0 | 1.0 | 0.0 |
| NMOJHIAC_132 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_133 | 1.0 | 0.0 | 1.0 |
| NMOJHIAC_134 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NMOJHIAC_2 | 3574 | 26495 | False | Siphoviridae | VOG4549, VOG0531, VOG4841, VOG4581, VOG4544, VOG3644, VOG4556, VOG4568, VOG4553, VOG5601, VOG0204, VOG4589, VOG0539, VOG0704, VOG4586, VOG2225, VOG6163, VOG4633, VOG4828, VOG4683, VOG4025, VOG4705 |
| NMOJHIAC_8 | 179 | 30425 | False | Siphoviridae | VOG4549, VOG3699, VOG10227, VOG0720, VOG4564, VOG5616, VOG4555, VOG0694, VOG1322, VOG4713, VOG1320, VOG9583, VOG1321, VOG0799, VOG0725, VOG1323, VOG0801, VOG4619, VOG5008, VOG0861, VOG7017, VOG0602, VOG4649 |
| NMOJHIAC_14 | 11035 | 46636 | False | Siphoviridae | VOG1309, VOG0186, VOG4855, VOG0189, VOG4688, VOG6623, VOG4693, VOG9741, VOG0152, VOG3643, VOG0044, VOG1563, VOG0198, VOG4570, VOG3699, VOG4544, VOG0691, VOG0692, VOG5616, VOG1300, VOG1183, VOG4555, VOG4711, VOG0695, VOG0696, VOG0697, VOG0698, VOG5587, VOG5601, VOG9763, VOG0701, VOG4705, VOG4605, VOG4599, VOG6455, VOG7896, VOG1637, VOG0703, VOG4918 |
Phigaro v2.4.0 (Database: Jan. 2024 release)