Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ADIICBFH_46 | 12074 | 12778 | WalR | 1.31e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| ADIICBFH_30 | 17848 | 17651 | CspR | 1.09e-33 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| ADIICBFH_71 | 5768 | 6826 | repUS75 | 1059 / 1059 | 99.91 | CP002393 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ADIICBFH_1 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_2 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_3 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_4 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_5 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_6 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_7 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_8 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_9 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_10 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_11 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_12 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_13 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_14 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_15 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_16 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_17 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_18 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_19 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_20 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_21 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_22 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_23 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_24 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_25 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_26 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_27 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_28 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_29 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_30 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_31 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_32 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_33 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_34 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_35 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_36 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_37 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_38 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_39 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_40 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_41 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_42 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_43 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_44 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_45 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_46 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_47 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_48 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_49 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_50 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_51 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_52 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_53 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_54 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_55 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_56 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_57 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_58 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_59 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_60 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_61 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_62 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_63 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_64 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_65 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_66 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_67 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_68 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_69 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_70 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_71 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_72 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_73 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_74 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_75 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_76 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_77 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_78 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_79 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_80 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_81 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_82 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_83 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_84 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_85 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_86 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_87 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_88 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_89 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_90 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_91 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_92 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_93 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_94 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_95 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_96 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_97 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_98 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_99 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_100 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_101 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_102 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_103 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_104 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_105 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_106 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_107 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_108 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_109 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_110 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_111 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_112 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_113 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_114 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_115 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_116 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_117 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_118 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_119 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_120 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_121 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_122 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_123 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_124 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_125 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_128 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_129 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_130 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_131 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_132 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_133 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_134 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_135 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_136 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_137 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_138 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_139 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_140 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_141 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_142 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_143 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_144 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_145 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_146 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_147 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_148 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_149 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_150 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_151 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_152 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_153 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_154 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_155 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_156 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_159 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_160 | 0.0 | 1.0 | 0.0 |
| ADIICBFH_161 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_163 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_164 | 1.0 | 0.0 | 1.0 |
| ADIICBFH_165 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ADIICBFH_6 | 6184 | 44960 | False | Siphoviridae | VOG8492, VOG0862, VOG8520, VOG5353, VOG0373, VOG10059, VOG9748, VOG0181, VOG3642, VOG4799, VOG0025, VOG7735, VOG7018, VOG0536, VOG9741, VOG4237, VOG0152, VOG3643, VOG0044, VOG1563, VOG0198, VOG4570, VOG10904, VOG4549, VOG6947, VOG1345, VOG4841, VOG4581, VOG4544, VOG3644, VOG4556, VOG4568, VOG4553, VOG0204, VOG4589, VOG0539, VOG0704, VOG4586, VOG2225, VOG0083, VOG6163, VOG4605, VOG4599, VOG6455, VOG7896, VOG0861, VOG7017, VOG0703 |
| ADIICBFH_9 | 20489 | 48502 | False | Siphoviridae | VOG0862, VOG5353, VOG4552, VOG0181, VOG10867, VOG3642, VOG4799, VOG0025, VOG7735, VOG0198, VOG9153, VOG5699, VOG4841, VOG0519, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG1898, VOG4545, VOG4633, VOG4763, VOG3498, VOG0648, VOG1637 |
| ADIICBFH_37 | 2047 | 23735 | False | Siphoviridae | VOG3699, VOG4544, VOG0720, VOG4564, VOG4564, VOG1300, VOG1183, VOG4555, VOG3434, VOG1887, VOG1322, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG6163, VOG4605, VOG4599, VOG6455, VOG7896, VOG7017, VOG0602 |
Phigaro v2.4.0 (Database: Jan. 2024 release)