Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DKEEAECG_1 | 221475 | 220771 | WalR | 2.04e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| DKEEAECG_21 | 52952 | 52755 | CspR | 9.53e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DKEEAECG_1 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_2 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_3 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_4 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_5 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_6 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_7 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_8 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_9 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_10 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_11 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_12 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_13 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_14 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_15 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_16 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_17 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_18 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_19 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_20 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_21 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_22 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_23 | 1.0 | 0.0 | 1.0 |
| DKEEAECG_24 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_25 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_26 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_27 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_28 | 1.0 | 0.0 | 1.0 |
| DKEEAECG_29 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_30 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_31 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_32 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_33 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_34 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_35 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_36 | 1.0 | 0.0 | 1.0 |
| DKEEAECG_37 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_38 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_39 | 1.0 | 0.0 | 1.0 |
| DKEEAECG_40 | 1.0 | 0.0 | 1.0 |
| DKEEAECG_41 | 1.0 | 0.0 | 1.0 |
| DKEEAECG_42 | 1.0 | 0.0 | 1.0 |
| DKEEAECG_43 | 1.0 | 0.0 | 1.0 |
| DKEEAECG_44 | 1.0 | 0.0 | 1.0 |
| DKEEAECG_45 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_46 | 1.0 | 0.0 | 1.0 |
| DKEEAECG_47 | 1.0 | 0.0 | 1.0 |
| DKEEAECG_48 | 1.0 | 0.0 | 1.0 |
| DKEEAECG_49 | 1.0 | 0.0 | 1.0 |
| DKEEAECG_50 | 1.0 | 0.0 | 1.0 |
| DKEEAECG_51 | 1.0 | 0.0 | 1.0 |
| DKEEAECG_52 | 1.0 | 0.0 | 1.0 |
| DKEEAECG_53 | 1.0 | 0.0 | 1.0 |
| DKEEAECG_54 | 0.0 | 1.0 | 0.0 |
| DKEEAECG_55 | 1.0 | 0.0 | 1.0 |
| DKEEAECG_57 | 1.0 | 0.0 | 1.0 |
| DKEEAECG_58 | 1.0 | 0.0 | 1.0 |
| DKEEAECG_59 | 1.0 | 0.0 | 1.0 |
| DKEEAECG_60 | 1.0 | 0.0 | 1.0 |
| DKEEAECG_61 | 1.0 | 0.0 | 1.0 |
| DKEEAECG_62 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DKEEAECG_21 | 785 | 31148 | False | Siphoviridae | VOG4605, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1322, VOG1887, VOG3434, VOG4555, VOG4564, VOG0720, VOG4544, VOG0796, VOG4570, VOG4892, VOG0198, VOG3643, VOG2820, VOG4643, VOG0275, VOG0195, VOG4567, VOG0536, VOG9860, VOG0189, VOG4566, VOG0685, VOG8241 |
| DKEEAECG_23 | 17069 | 26459 | False | Siphoviridae | VOG4609, VOG4581, VOG1886, VOG5051, VOG4556, VOG4568, VOG0204, VOG4589 |
| DKEEAECG_25 | 2 | 32177 | False | Siphoviridae | VOG4599, VOG4605, VOG6163, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG10303, VOG4553, VOG4568, VOG4556, VOG3644, VOG4544, VOG4581, VOG4841, VOG1345, VOG10904, VOG4570, VOG0198, VOG0044, VOG3643, VOG0152, VOG4237, VOG9741, VOG4693, VOG4813, VOG7735, VOG0025, VOG4799, VOG3642, VOG10867, VOG0181, VOG3459, VOG3711, VOG4552, VOG5353, VOG8520 |
Phigaro v2.4.0 (Database: Jan. 2024 release)