Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EJAGNDIM_37 | 10979 | 10275 | WalR | 1.08e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| EJAGNDIM_12 | 55201 | 55395 | CspR | 8.81e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| EJAGNDIM_12 | 55201 | 55398 | CspA | 1.35e-29 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| EJAGNDIM_52 | 122 | 1057 | rep28 | 937 / 936 | 81.22 | CP005948 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EJAGNDIM_1 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_2 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_3 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_4 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_5 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_6 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_7 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_8 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_9 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_10 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_11 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_12 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_13 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_14 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_15 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_16 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_17 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_18 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_19 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_20 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_21 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_22 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_23 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_24 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_25 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_26 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_27 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_28 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_29 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_30 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_31 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_32 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_33 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_34 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_35 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_36 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_37 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_38 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_39 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_40 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_41 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_42 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_43 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_44 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_45 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_46 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_47 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_48 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_49 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_50 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_51 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_52 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_53 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_54 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_55 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_56 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_57 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_58 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_59 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_60 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_61 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_62 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_63 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_64 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_66 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_67 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_68 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_69 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_70 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_71 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_72 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_74 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_75 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_76 | 1.0 | 0.0 | 1.0 |
| EJAGNDIM_78 | 0.0 | 1.0 | 0.0 |
| EJAGNDIM_88 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EJAGNDIM_7 | 639 | 21914 | False | Siphoviridae | VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0660, VOG4545, VOG4605, VOG4599, VOG10957, VOG8870, VOG0254, VOG10016 |
| EJAGNDIM_9 | 29677 | 37016 | False | Siphoviridae | VOG8925, VOG0321, VOG4548, VOG0322, VOG6545, VOG4632, VOG4609 |
| EJAGNDIM_9 | 40992 | 61563 | False | Siphoviridae | VOG4844, VOG4556, VOG4573, VOG4553, VOG0562, VOG4589, VOG0539, VOG0704, VOG4586, VOG0541, VOG6163, VOG0801, VOG4619, VOG3498, VOG9997, VOG8917, VOG9888 |
| EJAGNDIM_34 | 8674 | 29393 | False | Siphoviridae | VOG8870, VOG10957, VOG4599, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG5532, VOG3624, VOG0514, VOG0514, VOG0226, VOG0283, VOG0685, VOG5073, VOG0650, VOG3711, VOG4552, VOG4552 |
| EJAGNDIM_88 | 37905 | 47707 | False | Siphoviridae | VOG4609, VOG0205, VOG4841, VOG4581, VOG4544, VOG4556, VOG4568, VOG0204 |
| EJAGNDIM_88 | 59542 | 92527 | False | Siphoviridae | VOG1309, VOG0186, VOG5046, VOG0189, VOG4552, VOG4693, VOG0044, VOG0198, VOG0045, VOG0796, VOG4544, VOG0720, VOG7038, VOG4564, VOG10914, VOG3434, VOG1887, VOG4713, VOG1330, VOG0704, VOG4634, VOG1333, VOG4545, VOG1335, VOG10608, VOG3498, VOG8294 |
Phigaro v2.4.0 (Database: Jan. 2024 release)