Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KDEMKHJG_69 | 101148 | 100444 | WalR | 1.23e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| KDEMKHJG_57 | 17693 | 17496 | CspR | 4.07e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KDEMKHJG_1 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_2 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_3 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_4 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_5 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_6 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_7 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_8 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_9 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_10 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_11 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_12 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_13 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_14 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_15 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_16 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_17 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_18 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_19 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_22 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_33 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_40 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_41 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_42 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_43 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_44 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_45 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_46 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_47 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_48 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_49 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_50 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_51 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_52 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_53 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_54 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_55 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_56 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_57 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_58 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_59 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_60 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_61 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_62 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_63 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_64 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_65 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_66 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_67 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_68 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_69 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_70 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_71 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_72 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_73 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_74 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_75 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_76 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_77 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_78 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_79 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_80 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_81 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_82 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_83 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_84 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_85 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_86 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_87 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_88 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_89 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_90 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_91 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_92 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_93 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_94 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_95 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_96 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_97 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_98 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_99 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_100 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_101 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_102 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_103 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_105 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_106 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_107 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_108 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_109 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_110 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_111 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_112 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_113 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_114 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_115 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_116 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_117 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_118 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_119 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_120 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_121 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_122 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_123 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_124 | 0.0 | 1.0 | 0.0 |
| KDEMKHJG_125 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_126 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_127 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_128 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_129 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_130 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_131 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_132 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_133 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_134 | 1.0 | 0.0 | 1.0 |
| KDEMKHJG_135 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KDEMKHJG_33 | 28483 | 37719 | False | Siphoviridae | VOG4632, VOG4609, VOG4581, VOG4544, VOG1886, VOG5051, VOG4556, VOG4568, VOG0204 |
Phigaro v2.4.0 (Database: Jan. 2024 release)