safety

PPRS ARGs VFs PGs Plasmid Prophage IS elements

ARGs	VFs	PGs	PPRS
3	0	0	3.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Comprehensive Antibiotic Resistance Database (CARD)

Query ID	Begin	End	ARO name	ARO accession	CARD name	Identity	Coverage	Accession no.
IOJBBLAI_6	38061	38861	ErmF	ARO:3000498	ErmF	99.62	100.00	M17124.1
IOJBBLAI_6	36712	37848	tet(X)	ARO:3000205	tet(X)	99.74	97.42	M37699.1
IOJBBLAI_6	34049	35974	tet(Q)	ARO:3000191	tet(Q)	89.39	97.56	Z21523.1

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID	Begin	End	Resistance gene	Phenotype	Identity	Coverage	Accession no.
IOJBBLAI_6	38061	38861	erm(F)	Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S	100.00	100.00	M17808
IOJBBLAI_6	36682	37848	tet(X)	Doxycycline, Tetracycline, Minocycline, Tigecycline	99.91	100.00	M37699
IOJBBLAI_6	34049	35974	tet(Q)	Doxycycline, Tetracycline, Minocycline	90.61	99.95	L33696

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID	Begin	End	Gene symbol	Sequence name	Method	Identity	Coverage	Accession no.
IOJBBLAI_6	38064	38861	erm(F)	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)	EXACTX	100.00	100.00	WP_002682030.1
IOJBBLAI_6	36682	37845	tet(X2)	tetracycline-inactivating monooxygenase Tet(X2)	BLASTX	99.74	100.00	WP_008651082.1
IOJBBLAI_6	34049	35971	tet(Q)	tetracycline resistance ribosomal protection protein Tet(Q)	BLASTX	89.86	100.00	WP_063856407.1

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence Factor Database (VFDB)

Query ID	qstart	qend	Gene name	e-value	VF name	VF category	Identity	Coverage	Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID	Begin	End	Database	Virulence factor	Protein function	Identity	Coverage	Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

PHI-base

Query ID	qstart	qend	Gene name	e-value	Function	Identity	Coverage	Gene ID
No hit found

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

PlasmidFinder

Query ID	Begin	End	Plasmid	Query / Template	Identity	Accession no.
IOJBBLAI_28	69	748	repUS2	682 / 681	98.53	BFU30316

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID	Prediction	Chromosome	Plasmid
IOJBBLAI_1	0.0	1.0	0.0
IOJBBLAI_2	0.0	1.0	0.0
IOJBBLAI_3	0.0	1.0	0.0
IOJBBLAI_4	0.0	1.0	0.0
IOJBBLAI_5	0.0	1.0	0.0
IOJBBLAI_6	0.0	1.0	0.0
IOJBBLAI_7	0.0	1.0	0.0
IOJBBLAI_8	0.0	1.0	0.0
IOJBBLAI_9	0.0	1.0	0.0
IOJBBLAI_10	0.0	1.0	0.0
IOJBBLAI_11	0.0	1.0	0.0
IOJBBLAI_12	0.0	1.0	0.0
IOJBBLAI_13	0.0	1.0	0.0
IOJBBLAI_14	0.0	1.0	0.0
IOJBBLAI_15	0.0	1.0	0.0
IOJBBLAI_16	0.0	1.0	0.0
IOJBBLAI_17	1.0	0.0	1.0
IOJBBLAI_18	0.0	1.0	0.0
IOJBBLAI_19	1.0	0.0	1.0
IOJBBLAI_20	1.0	0.0	1.0
IOJBBLAI_21	0.0	1.0	0.0
IOJBBLAI_22	0.0	1.0	0.0
IOJBBLAI_23	0.0	1.0	0.0
IOJBBLAI_24	0.0	1.0	0.0
IOJBBLAI_25	1.0	0.0	1.0
IOJBBLAI_27	1.0	0.0	1.0
IOJBBLAI_28	1.0	0.0	1.0
IOJBBLAI_29	1.0	0.0	1.0
IOJBBLAI_30	1.0	0.0	1.0
IOJBBLAI_31	0.0	1.0	0.0
IOJBBLAI_32	1.0	0.0	1.0
IOJBBLAI_33	0.0	1.0	0.0
IOJBBLAI_34	0.0	1.0	0.0
IOJBBLAI_35	1.0	0.0	1.0
IOJBBLAI_37	1.0	0.0	1.0
IOJBBLAI_38	1.0	0.0	1.0
IOJBBLAI_39	0.0	1.0	0.0
IOJBBLAI_44	0.0	1.0	0.0
IOJBBLAI_49	0.0	1.0	0.0
IOJBBLAI_50	0.0	1.0	0.0
IOJBBLAI_51	0.0	1.0	0.0
IOJBBLAI_52	0.0	1.0	0.0
IOJBBLAI_53	0.0	1.0	0.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Phigaro

Query ID	Begin	End	Transposable	Taxonomy	pVOGs
IOJBBLAI_53	72544	82149	False	Unknown	VOG3992,

Phigaro v2.4.0 (Database: Jan. 2024 release)