Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IGIEIGDA_45 | 72193 | 72897 | WalR | 8.36e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| IGIEIGDA_5 | 65934 | 66128 | CspR | 3.34e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| IGIEIGDA_5 | 65934 | 66131 | CspA | 5.12e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| IGIEIGDA_51 | 3592 | 4527 | rep28 | 936 / 936 | 100.00 | CP005948 |
| IGIEIGDA_29 | 9927 | 10966 | rep38 | 1042 / 1104 | 88.48 | CP002655 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IGIEIGDA_2 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_3 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_4 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_5 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_6 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_7 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_8 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_9 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_10 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_11 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_12 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_13 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_14 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_15 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_16 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_17 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_18 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_19 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_20 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_21 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_22 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_23 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_24 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_25 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_26 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_27 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_28 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_29 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_30 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_31 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_32 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_33 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_34 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_35 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_36 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_37 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_38 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_39 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_40 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_41 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_42 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_43 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_44 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_45 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_46 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_47 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_48 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_49 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_50 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_51 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_52 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_53 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_54 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_55 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_56 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_57 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_58 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_59 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_60 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_61 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_62 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_63 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_64 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_65 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_66 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_67 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_68 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_69 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_70 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_71 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_72 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_73 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_75 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_76 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_77 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_78 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_80 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_81 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_82 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_83 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_84 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_85 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_86 | 1.0 | 0.0 | 1.0 |
| IGIEIGDA_89 | 0.0 | 1.0 | 0.0 |
| IGIEIGDA_100 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IGIEIGDA_10 | 3146 | 6800 | False | Siphoviridae | VOG0650, VOG3711, VOG4552, VOG8520, VOG8520, VOG4602 |
| IGIEIGDA_67 | 2406 | 35155 | False | Siphoviridae | VOG1637, VOG8294, VOG0703, VOG5008, VOG9531, VOG4619, VOG0801, VOG4910, VOG0701, VOG9763, VOG0698, VOG0697, VOG0696, VOG0695, VOG4572, VOG4555, VOG0692, VOG0691, VOG4544, VOG0796, VOG1183, VOG0198, VOG0044, VOG0586, VOG4693, VOG4855, VOG0535, VOG2703, VOG0052, VOG0181, VOG6495 |
Phigaro v2.4.0 (Database: Jan. 2024 release)