Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FBGEIANL_69 | 79132 | 78428 | WalR | 8.36e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| FBGEIANL_68 | 9700 | 9506 | CspR | 7.36e-31 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| FBGEIANL_68 | 9700 | 9503 | CspA | 1.13e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| FBGEIANL_81 | 4971 | 5906 | rep28 | 936 / 936 | 100.00 | CP005948 |
| FBGEIANL_52 | 19378 | 20417 | rep38 | 1042 / 1104 | 88.48 | CP002655 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FBGEIANL_1 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_2 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_11 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_22 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_28 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_29 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_30 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_31 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_32 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_33 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_34 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_35 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_36 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_37 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_38 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_39 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_40 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_41 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_42 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_43 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_44 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_45 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_46 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_47 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_48 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_49 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_50 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_51 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_52 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_53 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_54 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_55 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_56 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_57 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_58 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_59 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_60 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_61 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_62 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_63 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_64 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_65 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_66 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_67 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_68 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_69 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_70 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_71 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_72 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_73 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_74 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_75 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_76 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_77 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_78 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_79 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_80 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_81 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_82 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_83 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_84 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_85 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_86 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_87 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_88 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_89 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_90 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_91 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_92 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_93 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_94 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_95 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_96 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_97 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_98 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_99 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_100 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_101 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_102 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_103 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_104 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_106 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_107 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_108 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_109 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_110 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_111 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_112 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_113 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_115 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_116 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_117 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_118 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_119 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_120 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_121 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_122 | 0.0 | 1.0 | 0.0 |
| FBGEIANL_123 | 1.0 | 0.0 | 1.0 |
| FBGEIANL_124 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FBGEIANL_28 | 2406 | 35155 | False | Siphoviridae | VOG1637, VOG8294, VOG0703, VOG5008, VOG9531, VOG4619, VOG0801, VOG4910, VOG0701, VOG9763, VOG0698, VOG0697, VOG0696, VOG0695, VOG4572, VOG4555, VOG0692, VOG0691, VOG4544, VOG0796, VOG1183, VOG0198, VOG0044, VOG0586, VOG4693, VOG4855, VOG0535, VOG2703, VOG0052, VOG0181, VOG6495 |
| FBGEIANL_34 | 3146 | 6800 | False | Siphoviridae | VOG0650, VOG3711, VOG4552, VOG8520, VOG8520, VOG4602 |
Phigaro v2.4.0 (Database: Jan. 2024 release)