Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MHLEJIOM_56 | 22234 | 21530 | WalR | 4.04e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| MHLEJIOM_28 | 773 | 970 | CspR | 3.87e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MHLEJIOM_1 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_2 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_3 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_4 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_5 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_6 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_7 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_8 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_9 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_10 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_11 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_12 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_13 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_14 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_15 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_16 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_17 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_18 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_19 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_20 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_21 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_22 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_23 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_24 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_25 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_26 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_27 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_28 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_29 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_30 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_31 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_32 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_33 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_34 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_35 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_36 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_37 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_38 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_39 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_40 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_41 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_42 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_43 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_44 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_45 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_46 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_47 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_48 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_49 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_50 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_51 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_52 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_53 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_54 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_55 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_56 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_57 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_58 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_59 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_60 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_61 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_62 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_63 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_64 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_65 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_66 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_67 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_68 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_69 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_70 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_71 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_72 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_73 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_74 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_76 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_77 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_78 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_79 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_80 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_81 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_83 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_84 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_85 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_86 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_87 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_88 | 0.0 | 1.0 | 0.0 |
| MHLEJIOM_89 | 1.0 | 0.0 | 1.0 |
| MHLEJIOM_90 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MHLEJIOM_26 | 30795 | 36180 | False | Unknown | VOG4581, VOG4544, VOG5051, VOG4556, VOG4568 |
Phigaro v2.4.0 (Database: Jan. 2024 release)