Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HAAMLDOB_56 | 10953 | 11657 | WalR | 2.27e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| HAAMLDOB_73 | 5504 | 5701 | CspR | 6.10e-34 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HAAMLDOB_1 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_2 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_3 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_4 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_5 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_6 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_7 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_8 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_9 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_10 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_11 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_12 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_13 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_14 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_15 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_16 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_17 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_18 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_19 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_20 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_21 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_22 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_23 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_24 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_25 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_26 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_27 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_28 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_29 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_30 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_31 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_32 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_33 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_34 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_35 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_36 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_37 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_38 | 1.0 | 0.0 | 1.0 |
| HAAMLDOB_39 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_40 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_41 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_42 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_43 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_44 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_45 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_46 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_47 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_48 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_49 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_50 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_51 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_52 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_53 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_54 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_55 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_56 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_57 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_58 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_59 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_60 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_61 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_62 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_63 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_64 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_65 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_66 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_67 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_68 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_69 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_70 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_71 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_72 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_73 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_74 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_75 | 1.0 | 0.0 | 1.0 |
| HAAMLDOB_76 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_77 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_78 | 1.0 | 0.0 | 1.0 |
| HAAMLDOB_79 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_80 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_81 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_82 | 1.0 | 0.0 | 1.0 |
| HAAMLDOB_83 | 1.0 | 0.0 | 1.0 |
| HAAMLDOB_84 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_85 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_86 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_87 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_88 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_89 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_90 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_91 | 1.0 | 0.0 | 1.0 |
| HAAMLDOB_92 | 1.0 | 0.0 | 1.0 |
| HAAMLDOB_94 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_95 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_97 | 1.0 | 0.0 | 1.0 |
| HAAMLDOB_98 | 1.0 | 0.0 | 1.0 |
| HAAMLDOB_99 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_100 | 0.0 | 1.0 | 0.0 |
| HAAMLDOB_101 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HAAMLDOB_12 | 37968 | 48942 | False | Siphoviridae | VOG4589, VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4841, VOG4609, VOG4632, VOG1581, VOG10397 |
Phigaro v2.4.0 (Database: Jan. 2024 release)