Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HKNFCEOD_24 | 59659 | 60363 | WalR | 5.39e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| HKNFCEOD_76 | 10196 | 10393 | CspR | 8.53e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HKNFCEOD_1 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_2 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_3 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_4 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_5 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_6 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_7 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_8 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_9 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_10 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_11 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_12 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_13 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_14 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_15 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_16 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_17 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_18 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_19 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_20 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_21 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_22 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_24 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_25 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_26 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_27 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_35 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_46 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_57 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_68 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_76 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_77 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_78 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_79 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_80 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_81 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_82 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_83 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_84 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_85 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_86 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_87 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_88 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_89 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_90 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_91 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_92 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_93 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_94 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_95 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_96 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_97 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_98 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_99 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_100 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_101 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_102 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_103 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_104 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_105 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_106 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_107 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_108 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_109 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_110 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_111 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_112 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_113 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_114 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_115 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_116 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_117 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_118 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_119 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_120 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_121 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_122 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_123 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_124 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_125 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_126 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_127 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_128 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_129 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_130 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_131 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_132 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_133 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_134 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_135 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_136 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_137 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_138 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_139 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_140 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_141 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_142 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_143 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_144 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_145 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_146 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_147 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_148 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_149 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_150 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_151 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_152 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_153 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_154 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_155 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_156 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_157 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_158 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_159 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_160 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_162 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_163 | 0.0 | 1.0 | 0.0 |
| HKNFCEOD_164 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_165 | 1.0 | 0.0 | 1.0 |
| HKNFCEOD_166 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HKNFCEOD_76 | 30113 | 35058 | False | Unknown | VOG8241, VOG1309, VOG0186, VOG4566, VOG0189 |
| HKNFCEOD_83 | 43138 | 47801 | False | Myoviridae | VOG0275, VOG6495, VOG0376, VOG4918, VOG0703 |
| HKNFCEOD_106 | 5229 | 19467 | False | Siphoviridae | VOG6163, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG4568, VOG4556, VOG0202, VOG1886, VOG4581, VOG0195 |
| HKNFCEOD_109 | 1 | 16915 | False | Siphoviridae | VOG4605, VOG7316, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG5601, VOG4553, VOG4568, VOG4556, VOG3644, VOG4544, VOG4581, VOG4841 |
Phigaro v2.4.0 (Database: Jan. 2024 release)