Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IPCALPNM_1 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_2 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_3 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_4 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_5 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_6 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_7 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_8 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_9 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_10 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_11 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_12 | 1.0 | 0.0 | 1.0 |
| IPCALPNM_13 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_14 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_15 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_16 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_17 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_18 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_19 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_20 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_21 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_22 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_23 | 1.0 | 0.0 | 1.0 |
| IPCALPNM_24 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_25 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_26 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_27 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_28 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_29 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_30 | 1.0 | 0.0 | 1.0 |
| IPCALPNM_31 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_32 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_33 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_34 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_35 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_36 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_37 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_38 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_39 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_40 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_41 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_42 | 1.0 | 0.0 | 1.0 |
| IPCALPNM_43 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_44 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_46 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_47 | 1.0 | 0.0 | 1.0 |
| IPCALPNM_48 | 0.0 | 1.0 | 0.0 |
| IPCALPNM_50 | 1.0 | 0.0 | 1.0 |
| IPCALPNM_51 | 1.0 | 0.0 | 1.0 |
| IPCALPNM_52 | 1.0 | 0.0 | 1.0 |
| IPCALPNM_53 | 1.0 | 0.0 | 1.0 |
| IPCALPNM_54 | 1.0 | 0.0 | 1.0 |
| IPCALPNM_55 | 1.0 | 0.0 | 1.0 |
| IPCALPNM_56 | 1.0 | 0.0 | 1.0 |
| IPCALPNM_57 | 1.0 | 0.0 | 1.0 |
| IPCALPNM_58 | 1.0 | 0.0 | 1.0 |
| IPCALPNM_59 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IPCALPNM_1 | 119383 | 146162 | False | Siphoviridae | VOG0703, VOG5087, VOG0861, VOG4705, VOG9945, VOG4612, VOG4659, VOG4633, VOG4545, VOG4586, VOG0207, VOG8997, VOG10939, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG0198, VOG6005, VOG0327 |
| IPCALPNM_1 | 154197 | 197366 | False | Myoviridae | VOG8520, VOG8520, VOG4602, VOG3685, VOG3459, VOG3711, VOG9500, VOG6422, VOG0275, VOG10934, VOG0703, VOG5087, VOG0861, VOG4705, VOG9945, VOG5763, VOG4862, VOG4691, VOG3894, VOG4885, VOG4865, VOG3636, VOG3892, VOG3891, VOG3890, VOG5612, VOG4870, VOG1900, VOG3888, VOG4623, VOG4572, VOG4555, VOG4564, VOG0720, VOG4544, VOG1517, VOG1327, VOG1326, VOG4618, VOG4972, VOG0198, VOG4693, VOG5545, VOG4552, VOG9667, VOG4799, VOG0906 |
| IPCALPNM_2 | 72882 | 92668 | False | Siphoviridae | VOG9502, VOG0641, VOG4589, VOG0204, VOG4553, VOG4573, VOG4556, VOG4544, VOG4571, VOG0198, VOG4548, VOG0327, VOG4606, VOG0026, VOG0021, VOG1047 |
Phigaro v2.4.0 (Database: Jan. 2024 release)