Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CHJNNGPC_1 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_2 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_3 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_4 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_5 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_6 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_7 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_8 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_9 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_10 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_11 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_12 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_13 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_14 | 1.0 | 0.0 | 1.0 |
| CHJNNGPC_15 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_16 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_17 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_18 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_19 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_20 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_21 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_22 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_23 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_24 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_25 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_26 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_27 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_28 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_29 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_30 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_31 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_32 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_33 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_34 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_35 | 1.0 | 0.0 | 1.0 |
| CHJNNGPC_36 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_37 | 1.0 | 0.0 | 1.0 |
| CHJNNGPC_38 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_39 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_40 | 1.0 | 0.0 | 1.0 |
| CHJNNGPC_41 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_42 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_43 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_44 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_45 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_46 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_47 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_48 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_49 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_50 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_52 | 1.0 | 0.0 | 1.0 |
| CHJNNGPC_53 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_54 | 0.0 | 1.0 | 0.0 |
| CHJNNGPC_56 | 1.0 | 0.0 | 1.0 |
| CHJNNGPC_57 | 1.0 | 0.0 | 1.0 |
| CHJNNGPC_58 | 1.0 | 0.0 | 1.0 |
| CHJNNGPC_59 | 1.0 | 0.0 | 1.0 |
| CHJNNGPC_61 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CHJNNGPC_1 | 65390 | 91000 | False | Siphoviridae | VOG4618, VOG0612, VOG4544, VOG0691, VOG0692, VOG4555, VOG1329, VOG0695, VOG0696, VOG0697, VOG0698, VOG9763, VOG0701, VOG8263, VOG0801, VOG4619, VOG5859, VOG9945, VOG4705, VOG0861, VOG9888, VOG0686, VOG0703, VOG8294 |
| CHJNNGPC_3 | 13510 | 33480 | False | Siphoviridae | VOG1047, VOG0021, VOG0026, VOG4606, VOG0327, VOG4548, VOG0198, VOG4571, VOG1259, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG0641, VOG9502 |
| CHJNNGPC_20 | 11369 | 36885 | False | Myoviridae | VOG0198, VOG4972, VOG1326, VOG1327, VOG0611, VOG4544, VOG0720, VOG4564, VOG4555, VOG4572, VOG4623, VOG3888, VOG1900, VOG4870, VOG5612, VOG3890, VOG3891, VOG3892, VOG3636, VOG4865, VOG4885, VOG3894, VOG4691, VOG4862, VOG5763, VOG9945, VOG4705, VOG0861 |
Phigaro v2.4.0 (Database: Jan. 2024 release)