Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OEIHMOBM_31 | 8952 | 8251 | WalR | 3.27e-109 | transcriptional regulatory protein | 80.34 | 99.57 | EPH95667 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| OEIHMOBM_14 | 4868 | 5770 | rep38 | 903 / 903 | 99.22 | CP005943 |
| OEIHMOBM_65 | 4863 | 5792 | rep28 | 930 / 930 | 98.60 | CP003162 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OEIHMOBM_1 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_2 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_3 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_5 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_6 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_7 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_8 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_9 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_10 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_11 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_12 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_13 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_14 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_16 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_19 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_20 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_21 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_22 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_24 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_25 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_26 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_27 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_28 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_29 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_30 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_31 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_32 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_34 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_35 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_36 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_38 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_39 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_40 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_41 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_42 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_43 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_44 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_45 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_46 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_49 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_50 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_51 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_52 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_53 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_56 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_57 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_58 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_59 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_60 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_61 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_62 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_63 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_64 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_65 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_67 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_68 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_70 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_71 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_73 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_74 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_78 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_79 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_80 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_81 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_82 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_83 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_84 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_85 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_87 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_88 | 1.0 | 0.0 | 1.0 |
| OEIHMOBM_89 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_90 | 0.0 | 1.0 | 0.0 |
| OEIHMOBM_91 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OEIHMOBM_45 | 6536 | 37519 | False | Myoviridae | VOG6540, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG4910, VOG1026, VOG4699, VOG1352, VOG1883, VOG1353, VOG1329, VOG4555, VOG4564, VOG0720, VOG10227, VOG0796, VOG0045, VOG0198, VOG0586, VOG0044, VOG3307, VOG0189 |
Phigaro v2.4.0 (Database: Jan. 2024 release)