Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FDMMNAAN_27 | 8952 | 8251 | WalR | 3.27e-109 | transcriptional regulatory protein | 80.34 | 99.57 | EPH95667 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| FDMMNAAN_32 | 4869 | 5771 | rep38 | 903 / 903 | 99.22 | CP005943 |
| FDMMNAAN_41 | 5187 | 6116 | rep28 | 930 / 930 | 98.60 | CP003162 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FDMMNAAN_1 | 1.0 | 0.0 | 1.0 |
| FDMMNAAN_2 | 1.0 | 0.0 | 1.0 |
| FDMMNAAN_3 | 1.0 | 0.0 | 1.0 |
| FDMMNAAN_5 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_6 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_7 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_8 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_9 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_11 | 1.0 | 0.0 | 1.0 |
| FDMMNAAN_12 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_14 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_15 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_16 | 1.0 | 0.0 | 1.0 |
| FDMMNAAN_17 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_18 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_19 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_22 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_24 | 1.0 | 0.0 | 1.0 |
| FDMMNAAN_25 | 1.0 | 0.0 | 1.0 |
| FDMMNAAN_26 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_27 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_28 | 1.0 | 0.0 | 1.0 |
| FDMMNAAN_29 | 1.0 | 0.0 | 1.0 |
| FDMMNAAN_30 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_31 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_32 | 1.0 | 0.0 | 1.0 |
| FDMMNAAN_34 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_35 | 1.0 | 0.0 | 1.0 |
| FDMMNAAN_36 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_37 | 1.0 | 0.0 | 1.0 |
| FDMMNAAN_38 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_39 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_40 | 1.0 | 0.0 | 1.0 |
| FDMMNAAN_41 | 1.0 | 0.0 | 1.0 |
| FDMMNAAN_42 | 1.0 | 0.0 | 1.0 |
| FDMMNAAN_43 | 1.0 | 0.0 | 1.0 |
| FDMMNAAN_45 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_47 | 1.0 | 0.0 | 1.0 |
| FDMMNAAN_48 | 1.0 | 0.0 | 1.0 |
| FDMMNAAN_49 | 1.0 | 0.0 | 1.0 |
| FDMMNAAN_50 | 1.0 | 0.0 | 1.0 |
| FDMMNAAN_51 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_52 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_54 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_55 | 1.0 | 0.0 | 1.0 |
| FDMMNAAN_56 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_57 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_58 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_59 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_60 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_61 | 1.0 | 0.0 | 1.0 |
| FDMMNAAN_63 | 1.0 | 0.0 | 1.0 |
| FDMMNAAN_65 | 1.0 | 0.0 | 1.0 |
| FDMMNAAN_66 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_68 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_69 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_72 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_73 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_74 | 1.0 | 0.0 | 1.0 |
| FDMMNAAN_75 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_77 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_78 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_79 | 0.0 | 1.0 | 0.0 |
| FDMMNAAN_80 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FDMMNAAN_42 | 6536 | 37519 | False | Myoviridae | VOG6540, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG4910, VOG1026, VOG4699, VOG1352, VOG1883, VOG1353, VOG1329, VOG4555, VOG4564, VOG0720, VOG10227, VOG0796, VOG0045, VOG0198, VOG0586, VOG0044, VOG3307, VOG0189 |
Phigaro v2.4.0 (Database: Jan. 2024 release)