Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GLBDOHBD_36 | 11212 | 11949 | ErmB | ARO:3000375 | ErmB | 99.18 | 98.79 | AF242872.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| GLBDOHBD_36 | 11212 | 11949 | erm(B) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | X72021 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| GLBDOHBD_36 | 11215 | 11949 | erm(B) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | EXACTX | 100.00 | 100.00 | WP_001038795.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GLBDOHBD_1 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_2 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_3 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_4 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_5 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_6 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_7 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_8 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_9 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_10 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_11 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_12 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_13 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_14 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_15 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_16 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_17 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_18 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_19 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_20 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_21 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_22 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_23 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_24 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_25 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_26 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_27 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_28 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_29 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_30 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_31 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_32 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_33 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_34 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_35 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_36 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_37 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_38 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_39 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_40 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_41 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_42 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_43 | 1.0 | 0.0 | 1.0 |
| GLBDOHBD_44 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_45 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_46 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_47 | 1.0 | 0.0 | 1.0 |
| GLBDOHBD_48 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_49 | 1.0 | 0.0 | 1.0 |
| GLBDOHBD_50 | 1.0 | 0.0 | 1.0 |
| GLBDOHBD_51 | 1.0 | 0.0 | 1.0 |
| GLBDOHBD_52 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_53 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_54 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_55 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_56 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_57 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_58 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_59 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_60 | 1.0 | 0.0 | 1.0 |
| GLBDOHBD_62 | 1.0 | 0.0 | 1.0 |
| GLBDOHBD_63 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_64 | 1.0 | 0.0 | 1.0 |
| GLBDOHBD_65 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_66 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_67 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_68 | 1.0 | 0.0 | 1.0 |
| GLBDOHBD_69 | 1.0 | 0.0 | 1.0 |
| GLBDOHBD_70 | 1.0 | 0.0 | 1.0 |
| GLBDOHBD_71 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_72 | 1.0 | 0.0 | 1.0 |
| GLBDOHBD_73 | 1.0 | 0.0 | 1.0 |
| GLBDOHBD_74 | 1.0 | 0.0 | 1.0 |
| GLBDOHBD_75 | 1.0 | 0.0 | 1.0 |
| GLBDOHBD_77 | 1.0 | 0.0 | 1.0 |
| GLBDOHBD_79 | 1.0 | 0.0 | 1.0 |
| GLBDOHBD_81 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_82 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_84 | 1.0 | 0.0 | 1.0 |
| GLBDOHBD_86 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_87 | 1.0 | 0.0 | 1.0 |
| GLBDOHBD_89 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_90 | 1.0 | 0.0 | 1.0 |
| GLBDOHBD_91 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_92 | 1.0 | 0.0 | 1.0 |
| GLBDOHBD_94 | 1.0 | 0.0 | 1.0 |
| GLBDOHBD_95 | 0.0 | 1.0 | 0.0 |
| GLBDOHBD_96 | 1.0 | 0.0 | 1.0 |
| GLBDOHBD_98 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GLBDOHBD_4 | 98487 | 114231 | False | Unknown | VOG4609, |
Phigaro v2.4.0 (Database: Jan. 2024 release)