Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JJOHIHGB_1 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_2 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_3 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_4 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_5 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_6 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_7 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_8 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_9 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_10 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_11 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_12 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_13 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_14 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_15 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_16 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_17 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_18 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_19 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_20 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_21 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_22 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_23 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_24 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_25 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_26 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_27 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_28 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_29 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_30 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_31 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_32 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_33 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_34 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_35 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_36 | 1.0 | 0.0 | 1.0 |
| JJOHIHGB_37 | 1.0 | 0.0 | 1.0 |
| JJOHIHGB_38 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_39 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_40 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_41 | 1.0 | 0.0 | 1.0 |
| JJOHIHGB_42 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_43 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_44 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_45 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_46 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_47 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_48 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_49 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_50 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_51 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_52 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_53 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_54 | 1.0 | 0.0 | 1.0 |
| JJOHIHGB_55 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_56 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_57 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_58 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_59 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_60 | 1.0 | 0.0 | 1.0 |
| JJOHIHGB_61 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_62 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_63 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_65 | 1.0 | 0.0 | 1.0 |
| JJOHIHGB_66 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_67 | 1.0 | 0.0 | 1.0 |
| JJOHIHGB_68 | 0.0 | 1.0 | 0.0 |
| JJOHIHGB_69 | 1.0 | 0.0 | 1.0 |
| JJOHIHGB_70 | 1.0 | 0.0 | 1.0 |
| JJOHIHGB_71 | 1.0 | 0.0 | 1.0 |
| JJOHIHGB_72 | 1.0 | 0.0 | 1.0 |
| JJOHIHGB_74 | 1.0 | 0.0 | 1.0 |
| JJOHIHGB_75 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JJOHIHGB_3 | 53255 | 76838 | False | Siphoviridae | VOG9502, VOG0641, VOG4589, VOG0204, VOG4553, VOG4573, VOG4556, VOG4544, VOG4571, VOG0198, VOG4548, VOG0327, VOG4606, VOG0026, VOG0021, VOG1047, VOG7438, VOG0052, VOG0083 |
| JJOHIHGB_9 | 16360 | 26725 | False | Siphoviridae | VOG0020, VOG0275, VOG9312, VOG7298, VOG9667, VOG4552, VOG2703, VOG0685, VOG0283, VOG4799, VOG9667, VOG7236, VOG3307 |
| JJOHIHGB_9 | 30613 | 52244 | False | Siphoviridae | VOG4618, VOG0612, VOG4544, VOG0691, VOG0692, VOG4555, VOG1329, VOG0695, VOG0696, VOG0697, VOG0698, VOG9763, VOG0701, VOG4545, VOG0801, VOG4619, VOG9945, VOG4705, VOG0861 |
| JJOHIHGB_12 | 12487 | 40322 | False | Siphoviridae | VOG0861, VOG4705, VOG9945, VOG4612, VOG4659, VOG4633, VOG4760, VOG4586, VOG0207, VOG10939, VOG0204, VOG4553, VOG4573, VOG4556, VOG1026, VOG0202, VOG1886, VOG9438, VOG4581, VOG4841, VOG0198, VOG7287 |
Phigaro v2.4.0 (Database: Jan. 2024 release)