Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| NCHBIOJM_70 | 1 | 682 | aph(3')-Ia | Kanamycin, Neomycin, Unknown Aminoglycoside, Neomycin, Kanamycin, Lividomycin, Paromomycin, Ribostamycin, Kanamycin | 99.71 | 83.58 | V00359 |
| NCHBIOJM_95 | 2 | 539 | aadA1 | Spectinomycin, Streptomycin | 99.63 | 68.06 | JQ480156 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NCHBIOJM_70 | 2 | 682 | aph(3')-Ia | aminoglycoside O-phosphotransferase APH(3')-Ia | PARTIAL_CONTIG_ENDX | 100.00 | 83.76 | WP_000018329.1 |
| NCHBIOJM_95 | 8 | 538 | aadA1 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1 | PARTIAL_CONTIG_ENDX | 99.44 | 67.56 | WP_001206315.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| NCHBIOJM_86 | 1 | 393 | repUS16 | 393 / 600 | 100.00 | GQ900438 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NCHBIOJM_1 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_2 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_3 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_4 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_5 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_6 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_7 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_8 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_9 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_10 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_11 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_12 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_13 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_14 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_15 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_16 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_17 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_18 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_19 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_20 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_21 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_22 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_23 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_24 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_25 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_26 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_27 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_28 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_30 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_31 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_32 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_33 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_34 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_35 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_36 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_37 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_38 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_39 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_40 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_41 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_42 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_43 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_44 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_45 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_46 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_47 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_48 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_49 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_50 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_51 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_52 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_53 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_54 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_55 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_57 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_58 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_59 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_60 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_62 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_63 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_64 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_65 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_66 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_67 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_68 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_69 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_71 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_77 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_82 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_88 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_89 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_96 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_103 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_107 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_110 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_114 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_119 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_126 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_134 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_142 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_147 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_148 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_155 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_159 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_165 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_168 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_174 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_179 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_181 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_185 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_192 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_198 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_199 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_203 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_207 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_214 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_220 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_222 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_227 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_231 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_237 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_243 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_248 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_249 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_260 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_271 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_282 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_293 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_304 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_315 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_326 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_331 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_332 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_333 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_334 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_335 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_336 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_337 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_338 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_339 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_340 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_341 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_342 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_343 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_344 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_345 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_346 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_347 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_348 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_349 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_350 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_351 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_352 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_353 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_354 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_355 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_356 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_357 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_358 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_359 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_360 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_361 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_362 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_363 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_364 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_365 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_366 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_367 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_368 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_369 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_370 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_371 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_372 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_373 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_374 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_375 | 1.0 | 0.0 | 1.0 |
| NCHBIOJM_377 | 0.0 | 1.0 | 0.0 |
| NCHBIOJM_378 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NCHBIOJM_367 | 5312 | 36882 | False | Siphoviridae | VOG5357, VOG4659, VOG4633, VOG4545, VOG0701, VOG0698, VOG0697, VOG0696, VOG0695, VOG1329, VOG9317, VOG0692, VOG5047, VOG0692, VOG0691, VOG4544, VOG0796, VOG0198, VOG9667, VOG9667, VOG0226, VOG0189, VOG4566, VOG0283, VOG9708 |
Phigaro v2.4.0 (Database: Jan. 2024 release)