Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PPACLKLL_2 | 120003 | 120905 | cepA | ARO:3003559 | cepA | 100.00 | 100.00 | U05883.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| PPACLKLL_2 | 120003 | 120905 | cepA | Unknown Beta-lactam | 99.56 | 100.00 | FR688022 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PPACLKLL_2 | 120003 | 120902 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005795628.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PPACLKLL_1 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_2 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_3 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_4 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_5 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_6 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_7 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_8 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_9 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_10 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_11 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_12 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_13 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_14 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_15 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_16 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_17 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_18 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_19 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_20 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_21 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_22 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_23 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_24 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_25 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_26 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_27 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_28 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_29 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_30 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_31 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_32 | 1.0 | 0.0 | 1.0 |
| PPACLKLL_33 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_34 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_35 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_36 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_37 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_38 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_39 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_40 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_41 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_42 | 1.0 | 0.0 | 1.0 |
| PPACLKLL_43 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_44 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_45 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_46 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_47 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_48 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_49 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_50 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_51 | 1.0 | 0.0 | 1.0 |
| PPACLKLL_52 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_53 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_54 | 1.0 | 0.0 | 1.0 |
| PPACLKLL_55 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_56 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_57 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_58 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_59 | 1.0 | 0.0 | 1.0 |
| PPACLKLL_60 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_61 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_62 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_63 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_64 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_65 | 0.0 | 1.0 | 0.0 |
| PPACLKLL_66 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)