Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IAJIAJLA_3 | 2181 | 3146 | CfxA4 | ARO:3003005 | CfxA4 | 100.00 | 100.00 | AY769933.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IAJIAJLA_3 | 2181 | 3146 | cfxA4 | Unknown Beta-lactam | 100.00 | 100.00 | AY769933 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IAJIAJLA_3 | 2181 | 3143 | cfxA4 | extended-spectrum class A beta-lactamase CfxA4 | EXACTX | 100.00 | 100.00 | WP_057280848.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IAJIAJLA_43 | 77649 | 79229 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IAJIAJLA_1 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_2 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_3 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_4 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_5 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_6 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_7 | 1.0 | 0.0 | 1.0 |
| IAJIAJLA_8 | 1.0 | 0.0 | 1.0 |
| IAJIAJLA_9 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_10 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_11 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_12 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_13 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_14 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_15 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_17 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_18 | 1.0 | 0.0 | 1.0 |
| IAJIAJLA_19 | 1.0 | 0.0 | 1.0 |
| IAJIAJLA_20 | 1.0 | 0.0 | 1.0 |
| IAJIAJLA_21 | 1.0 | 0.0 | 1.0 |
| IAJIAJLA_22 | 1.0 | 0.0 | 1.0 |
| IAJIAJLA_24 | 1.0 | 0.0 | 1.0 |
| IAJIAJLA_26 | 1.0 | 0.0 | 1.0 |
| IAJIAJLA_27 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_28 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_29 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_30 | 1.0 | 0.0 | 1.0 |
| IAJIAJLA_31 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_32 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_33 | 1.0 | 0.0 | 1.0 |
| IAJIAJLA_34 | 1.0 | 0.0 | 1.0 |
| IAJIAJLA_35 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_36 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_37 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_38 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_39 | 1.0 | 0.0 | 1.0 |
| IAJIAJLA_40 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_41 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_42 | 1.0 | 0.0 | 1.0 |
| IAJIAJLA_43 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_44 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_45 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_46 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_47 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_48 | 1.0 | 0.0 | 1.0 |
| IAJIAJLA_49 | 1.0 | 0.0 | 1.0 |
| IAJIAJLA_50 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_51 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_52 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_53 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_54 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_55 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_56 | 1.0 | 0.0 | 1.0 |
| IAJIAJLA_57 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_58 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_59 | 1.0 | 0.0 | 1.0 |
| IAJIAJLA_60 | 1.0 | 0.0 | 1.0 |
| IAJIAJLA_61 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_62 | 1.0 | 0.0 | 1.0 |
| IAJIAJLA_63 | 0.0 | 1.0 | 0.0 |
| IAJIAJLA_64 | 1.0 | 0.0 | 1.0 |
| IAJIAJLA_65 | 1.0 | 0.0 | 1.0 |
| IAJIAJLA_66 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)