Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CINAIHGM_1 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_2 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_3 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_4 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_5 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_6 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_7 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_8 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_9 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_10 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_11 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_12 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_13 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_14 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_15 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_16 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_17 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_18 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_19 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_20 | 1.0 | 0.0 | 1.0 |
| CINAIHGM_21 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_22 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_23 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_24 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_25 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_26 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_27 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_28 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_29 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_30 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_31 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_32 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_33 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_34 | 1.0 | 0.0 | 1.0 |
| CINAIHGM_35 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_36 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_37 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_38 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_39 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_40 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_41 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_42 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_43 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_44 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_45 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_46 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_47 | 1.0 | 0.0 | 1.0 |
| CINAIHGM_48 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_49 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_50 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_51 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_52 | 0.0 | 1.0 | 0.0 |
| CINAIHGM_53 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CINAIHGM_27 | 16511 | 21082 | False | Unknown | VOG4552, |
Phigaro v2.4.0 (Database: Jan. 2024 release)