Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DECDAODI_44 | 139913 | 140815 | CepA-44 | ARO:3006225 | CepA-44 | 99.33 | 100.00 | NG_050386.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DECDAODI_44 | 139913 | 140815 | cepA | Unknown Beta-lactam | 99.89 | 100.00 | U05887 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DECDAODI_44 | 139913 | 140812 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.67 | 100.00 | WP_005816369.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DECDAODI_1 | 0.0 | 1.0 | 0.0 |
| DECDAODI_2 | 0.0 | 1.0 | 0.0 |
| DECDAODI_3 | 0.0 | 1.0 | 0.0 |
| DECDAODI_4 | 1.0 | 0.0 | 1.0 |
| DECDAODI_5 | 0.0 | 1.0 | 0.0 |
| DECDAODI_6 | 0.0 | 1.0 | 0.0 |
| DECDAODI_7 | 0.0 | 1.0 | 0.0 |
| DECDAODI_8 | 0.0 | 1.0 | 0.0 |
| DECDAODI_9 | 0.0 | 1.0 | 0.0 |
| DECDAODI_10 | 0.0 | 1.0 | 0.0 |
| DECDAODI_11 | 0.0 | 1.0 | 0.0 |
| DECDAODI_12 | 0.0 | 1.0 | 0.0 |
| DECDAODI_13 | 0.0 | 1.0 | 0.0 |
| DECDAODI_14 | 1.0 | 0.0 | 1.0 |
| DECDAODI_15 | 0.0 | 1.0 | 0.0 |
| DECDAODI_16 | 0.0 | 1.0 | 0.0 |
| DECDAODI_17 | 0.0 | 1.0 | 0.0 |
| DECDAODI_18 | 0.0 | 1.0 | 0.0 |
| DECDAODI_19 | 0.0 | 1.0 | 0.0 |
| DECDAODI_20 | 0.0 | 1.0 | 0.0 |
| DECDAODI_21 | 0.0 | 1.0 | 0.0 |
| DECDAODI_22 | 0.0 | 1.0 | 0.0 |
| DECDAODI_23 | 0.0 | 1.0 | 0.0 |
| DECDAODI_24 | 0.0 | 1.0 | 0.0 |
| DECDAODI_25 | 0.0 | 1.0 | 0.0 |
| DECDAODI_26 | 0.0 | 1.0 | 0.0 |
| DECDAODI_27 | 0.0 | 1.0 | 0.0 |
| DECDAODI_28 | 0.0 | 1.0 | 0.0 |
| DECDAODI_29 | 0.0 | 1.0 | 0.0 |
| DECDAODI_30 | 0.0 | 1.0 | 0.0 |
| DECDAODI_31 | 0.0 | 1.0 | 0.0 |
| DECDAODI_32 | 0.0 | 1.0 | 0.0 |
| DECDAODI_33 | 1.0 | 0.0 | 1.0 |
| DECDAODI_34 | 0.0 | 1.0 | 0.0 |
| DECDAODI_35 | 0.0 | 1.0 | 0.0 |
| DECDAODI_36 | 0.0 | 1.0 | 0.0 |
| DECDAODI_37 | 0.0 | 1.0 | 0.0 |
| DECDAODI_38 | 0.0 | 1.0 | 0.0 |
| DECDAODI_39 | 0.0 | 1.0 | 0.0 |
| DECDAODI_40 | 0.0 | 1.0 | 0.0 |
| DECDAODI_41 | 0.0 | 1.0 | 0.0 |
| DECDAODI_42 | 0.0 | 1.0 | 0.0 |
| DECDAODI_43 | 0.0 | 1.0 | 0.0 |
| DECDAODI_44 | 0.0 | 1.0 | 0.0 |
| DECDAODI_45 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DECDAODI_2 | 13376 | 22449 | False | Siphoviridae | VOG7238, |
| DECDAODI_36 | 299830 | 311534 | False | Unknown | VOG0298, |
Phigaro v2.4.0 (Database: Jan. 2024 release)