Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JEEPOLEH_72 | 166847 | 165267 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JEEPOLEH_1 | 1.0 | 0.0 | 1.0 |
| JEEPOLEH_2 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_3 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_4 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_5 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_6 | 1.0 | 0.0 | 1.0 |
| JEEPOLEH_7 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_8 | 1.0 | 0.0 | 1.0 |
| JEEPOLEH_9 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_10 | 1.0 | 0.0 | 1.0 |
| JEEPOLEH_11 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_12 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_13 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_14 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_15 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_16 | 1.0 | 0.0 | 1.0 |
| JEEPOLEH_17 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_18 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_19 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_20 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_21 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_22 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_23 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_24 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_25 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_26 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_27 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_28 | 1.0 | 0.0 | 1.0 |
| JEEPOLEH_29 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_30 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_31 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_32 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_33 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_34 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_35 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_36 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_37 | 1.0 | 0.0 | 1.0 |
| JEEPOLEH_38 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_39 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_40 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_41 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_42 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_43 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_44 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_45 | 1.0 | 0.0 | 1.0 |
| JEEPOLEH_46 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_47 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_48 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_49 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_50 | 1.0 | 0.0 | 1.0 |
| JEEPOLEH_52 | 1.0 | 0.0 | 1.0 |
| JEEPOLEH_53 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_54 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_55 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_56 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_57 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_58 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_59 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_60 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_61 | 1.0 | 0.0 | 1.0 |
| JEEPOLEH_62 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_63 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_64 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_65 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_66 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_67 | 1.0 | 0.0 | 1.0 |
| JEEPOLEH_68 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_69 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_70 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_71 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_72 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_73 | 1.0 | 0.0 | 1.0 |
| JEEPOLEH_74 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_75 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_76 | 0.0 | 1.0 | 0.0 |
| JEEPOLEH_77 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JEEPOLEH_26 | 9511 | 13334 | False | Unknown | VOG0159, |
Phigaro v2.4.0 (Database: Jan. 2024 release)