Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| APNHNFNG_22 | 94779 | 95684 | blaMUN-1 | MUN family extended-spectrum class A beta-lactamase MUN-1 | ALLELEX | 100.00 | 100.00 | WP_206340447.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| APNHNFNG_20 | 6510 | 4930 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| APNHNFNG_1 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_2 | 1.0 | 0.0 | 1.0 |
| APNHNFNG_3 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_4 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_5 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_6 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_7 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_8 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_9 | 1.0 | 0.0 | 1.0 |
| APNHNFNG_10 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_11 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_12 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_13 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_14 | 1.0 | 0.0 | 1.0 |
| APNHNFNG_15 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_16 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_17 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_18 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_19 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_20 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_21 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_22 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_23 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_24 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_25 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_26 | 1.0 | 0.0 | 1.0 |
| APNHNFNG_27 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_28 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_29 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_30 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_31 | 1.0 | 0.0 | 1.0 |
| APNHNFNG_32 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_33 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_34 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_35 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_36 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_37 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_38 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_39 | 1.0 | 0.0 | 1.0 |
| APNHNFNG_40 | 1.0 | 0.0 | 1.0 |
| APNHNFNG_41 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_42 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_43 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_44 | 1.0 | 0.0 | 1.0 |
| APNHNFNG_45 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_46 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_47 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_48 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_49 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_50 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_51 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_52 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_53 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_54 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_55 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_56 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_57 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_58 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_59 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_60 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_61 | 1.0 | 0.0 | 1.0 |
| APNHNFNG_62 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_63 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_64 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_65 | 0.0 | 1.0 | 0.0 |
| APNHNFNG_66 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)