Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LNDJPGEI_133 | 9947 | 10837 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LNDJPGEI_133 | 9950 | 10837 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LNDJPGEI_1 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_2 | 1.0 | 0.0 | 1.0 |
| LNDJPGEI_3 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_4 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_5 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_6 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_7 | 1.0 | 0.0 | 1.0 |
| LNDJPGEI_8 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_9 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_10 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_11 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_12 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_13 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_14 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_15 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_16 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_17 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_18 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_19 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_20 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_21 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_22 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_23 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_24 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_25 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_26 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_27 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_28 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_29 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_30 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_31 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_32 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_33 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_34 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_35 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_36 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_37 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_38 | 1.0 | 0.0 | 1.0 |
| LNDJPGEI_39 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_40 | 1.0 | 0.0 | 1.0 |
| LNDJPGEI_41 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_42 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_43 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_44 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_45 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_46 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_47 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_48 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_49 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_50 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_51 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_52 | 1.0 | 0.0 | 1.0 |
| LNDJPGEI_53 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_54 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_55 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_56 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_57 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_58 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_59 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_60 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_61 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_62 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_63 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_64 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_65 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_66 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_67 | 1.0 | 0.0 | 1.0 |
| LNDJPGEI_68 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_69 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_70 | 1.0 | 0.0 | 1.0 |
| LNDJPGEI_71 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_72 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_73 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_74 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_75 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_76 | 1.0 | 0.0 | 1.0 |
| LNDJPGEI_77 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_78 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_79 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_80 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_81 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_82 | 1.0 | 0.0 | 1.0 |
| LNDJPGEI_83 | 1.0 | 0.0 | 1.0 |
| LNDJPGEI_84 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_85 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_86 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_87 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_88 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_89 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_90 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_91 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_92 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_93 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_94 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_95 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_96 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_97 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_98 | 1.0 | 0.0 | 1.0 |
| LNDJPGEI_99 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_100 | 1.0 | 0.0 | 1.0 |
| LNDJPGEI_101 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_102 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_103 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_104 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_105 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_106 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_107 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_108 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_109 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_110 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_111 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_112 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_113 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_114 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_115 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_116 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_117 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_118 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_119 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_120 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_121 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_122 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_123 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_124 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_125 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_126 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_127 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_128 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_129 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_130 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_131 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_132 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_133 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_134 | 1.0 | 0.0 | 1.0 |
| LNDJPGEI_135 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_136 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_137 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_138 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_139 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_140 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_141 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_142 | 1.0 | 0.0 | 1.0 |
| LNDJPGEI_143 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_144 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_145 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_146 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_147 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_148 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_149 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_150 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_151 | 1.0 | 0.0 | 1.0 |
| LNDJPGEI_152 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_153 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_154 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_155 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_156 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_157 | 0.0 | 1.0 | 0.0 |
| LNDJPGEI_158 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| LNDJPGEI_74 | 21032 | 33495 | False | Unknown | VOG8174, |
| LNDJPGEI_81 | 64035 | 77542 | False | Siphoviridae | VOG0536, |
Phigaro v2.4.0 (Database: Jan. 2024 release)