Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DNEGJBAD_104 | 102809 | 104389 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.72 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DNEGJBAD_1 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_2 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_3 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_4 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_5 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_6 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_7 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_8 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_9 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_10 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_11 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_12 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_13 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_14 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_15 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_16 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_17 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_18 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_19 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_20 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_21 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_22 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_23 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_24 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_25 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_26 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_27 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_28 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_29 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_30 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_31 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_32 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_33 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_34 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_35 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_36 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_37 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_38 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_39 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_40 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_41 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_42 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_43 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_44 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_45 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_46 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_47 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_48 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_49 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_50 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_51 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_52 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_53 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_54 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_55 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_56 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_57 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_58 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_59 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_60 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_61 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_62 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_63 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_64 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_65 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_66 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_67 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_68 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_69 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_70 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_71 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_72 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_73 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_74 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_75 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_76 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_77 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_78 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_79 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_80 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_81 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_82 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_83 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_84 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_85 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_86 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_87 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_88 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_89 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_90 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_91 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_92 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_93 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_94 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_95 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_96 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_97 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_98 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_99 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_100 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_101 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_102 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_103 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_104 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_105 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_106 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_108 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_109 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_110 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_111 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_112 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_113 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_114 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_115 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_116 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_117 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_118 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_119 | 1.0 | 0.0 | 1.0 |
| DNEGJBAD_120 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_121 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_122 | 0.0 | 1.0 | 0.0 |
| DNEGJBAD_123 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DNEGJBAD_117 | 75217 | 79023 | True | Siphoviridae | VOG0275, |
Phigaro v2.4.0 (Database: Jan. 2024 release)