Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| APOPCBJG_48 | 10946 | 11680 | ErmG | ARO:3000522 | ErmG | 99.18 | 100.00 | L42817.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| APOPCBJG_48 | 10946 | 11680 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.59 | 100.00 | M15332 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| APOPCBJG_48 | 10949 | 11680 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | BLASTX | 99.18 | 100.00 | WP_014387027.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| APOPCBJG_1 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_2 | 1.0 | 0.0 | 1.0 |
| APOPCBJG_3 | 1.0 | 0.0 | 1.0 |
| APOPCBJG_4 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_5 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_6 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_7 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_8 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_9 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_10 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_11 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_12 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_13 | 1.0 | 0.0 | 1.0 |
| APOPCBJG_14 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_15 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_16 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_17 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_18 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_19 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_20 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_21 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_22 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_23 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_24 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_25 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_26 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_28 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_29 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_30 | 1.0 | 0.0 | 1.0 |
| APOPCBJG_31 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_32 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_33 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_34 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_35 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_36 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_37 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_38 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_39 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_40 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_41 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_42 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_43 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_44 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_45 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_46 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_47 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_48 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_49 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_50 | 1.0 | 0.0 | 1.0 |
| APOPCBJG_51 | 1.0 | 0.0 | 1.0 |
| APOPCBJG_52 | 1.0 | 0.0 | 1.0 |
| APOPCBJG_53 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_54 | 0.0 | 1.0 | 0.0 |
| APOPCBJG_55 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| APOPCBJG_22 | 29032 | 39648 | False | Siphoviridae | VOG4581, |
Phigaro v2.4.0 (Database: Jan. 2024 release)