Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JDMHGBGP_49 | 11269 | 13194 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| JDMHGBGP_49 | 2791 | 4716 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JDMHGBGP_49 | 11269 | 13194 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JDMHGBGP_49 | 11269 | 13191 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| JDMHGBGP_49 | 2791 | 4713 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JDMHGBGP_1 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_2 | 1.0 | 0.0 | 1.0 |
| JDMHGBGP_3 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_4 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_5 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_6 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_7 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_8 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_9 | 1.0 | 0.0 | 1.0 |
| JDMHGBGP_10 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_11 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_12 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_13 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_14 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_15 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_16 | 1.0 | 0.0 | 1.0 |
| JDMHGBGP_17 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_18 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_19 | 1.0 | 0.0 | 1.0 |
| JDMHGBGP_20 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_21 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_22 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_23 | 1.0 | 0.0 | 1.0 |
| JDMHGBGP_24 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_25 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_26 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_27 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_28 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_29 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_30 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_31 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_32 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_33 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_34 | 1.0 | 0.0 | 1.0 |
| JDMHGBGP_35 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_36 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_37 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_38 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_39 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_40 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_41 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_42 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_43 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_44 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_45 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_46 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_47 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_48 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_49 | 1.0 | 0.0 | 1.0 |
| JDMHGBGP_50 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_51 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_52 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_53 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_54 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_55 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_56 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_57 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_58 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_59 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_60 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_61 | 1.0 | 0.0 | 1.0 |
| JDMHGBGP_62 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_63 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_64 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_65 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_66 | 1.0 | 0.0 | 1.0 |
| JDMHGBGP_67 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_68 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_69 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_70 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_71 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_72 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_73 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_74 | 1.0 | 0.0 | 1.0 |
| JDMHGBGP_75 | 1.0 | 0.0 | 1.0 |
| JDMHGBGP_76 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_77 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_78 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_79 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_80 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_81 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_82 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_83 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_84 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_85 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_86 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_87 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_88 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_89 | 1.0 | 0.0 | 1.0 |
| JDMHGBGP_90 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_91 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_92 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_93 | 0.0 | 1.0 | 0.0 |
| JDMHGBGP_94 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)