Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JFGEHPLK_179 | 125 | 1339 | mef(A) | Erythromycin, Azithromycin | 94.57 | 99.75 | AF227520 |
| JFGEHPLK_179 | 1465 | 2422 | msr(D) | Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 97.70 | 65.44 | AF274302 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JFGEHPLK_179 | 125 | 1348 | mef(A) | macrolide efflux MFS transporter Mef(A) | BLASTX | 98.53 | 100.00 | WP_012102963.1 |
| JFGEHPLK_179 | 1465 | 2427 | msr(D) | ABC-F type ribosomal protection protein Msr(D) | PARTIALX | 96.57 | 65.91 | WP_000420313.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JFGEHPLK_161 | 27585 | 26005 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JFGEHPLK_1 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_2 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_3 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_4 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_5 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_6 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_7 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_8 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_9 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_10 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_11 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_12 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_13 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_14 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_15 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_16 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_17 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_18 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_19 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_20 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_21 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_22 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_23 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_24 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_25 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_26 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_27 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_28 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_29 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_30 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_31 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_32 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_33 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_34 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_35 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_36 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_37 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_38 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_39 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_40 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_41 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_42 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_43 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_44 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_45 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_46 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_47 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_48 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_49 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_50 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_51 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_52 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_53 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_54 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_55 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_56 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_57 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_58 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_59 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_60 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_61 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_62 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_63 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_64 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_65 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_66 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_67 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_68 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_69 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_70 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_71 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_72 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_73 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_74 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_75 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_76 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_77 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_78 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_79 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_80 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_81 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_82 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_83 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_84 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_85 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_86 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_87 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_88 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_89 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_90 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_91 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_92 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_93 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_94 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_95 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_96 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_97 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_98 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_99 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_100 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_101 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_102 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_103 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_104 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_105 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_106 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_107 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_108 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_109 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_110 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_111 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_112 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_113 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_114 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_115 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_116 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_117 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_118 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_119 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_120 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_121 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_122 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_123 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_124 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_125 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_126 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_127 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_128 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_129 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_130 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_131 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_132 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_133 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_134 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_135 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_136 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_137 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_138 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_139 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_140 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_141 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_142 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_143 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_144 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_145 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_146 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_147 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_148 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_149 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_150 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_151 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_152 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_153 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_154 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_155 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_156 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_157 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_158 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_159 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_160 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_161 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_162 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_163 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_164 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_165 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_166 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_167 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_168 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_169 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_170 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_171 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_172 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_173 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_174 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_175 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_176 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_177 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_178 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_179 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_180 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_181 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_182 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_183 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_184 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_185 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_186 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_187 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_188 | 1.0 | 0.0 | 1.0 |
| JFGEHPLK_189 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_190 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_191 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_192 | 0.0 | 1.0 | 0.0 |
| JFGEHPLK_193 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)