Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LDLOKCNF_44 | 246606 | 247811 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LDLOKCNF_44 | 246072 | 246581 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| LDLOKCNF_44 | 246609 | 247811 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LDLOKCNF_1 | 1.0 | 0.0 | 1.0 |
| LDLOKCNF_2 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_3 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_4 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_5 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_6 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_7 | 1.0 | 0.0 | 1.0 |
| LDLOKCNF_8 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_9 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_10 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_11 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_12 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_13 | 1.0 | 0.0 | 1.0 |
| LDLOKCNF_14 | 1.0 | 0.0 | 1.0 |
| LDLOKCNF_15 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_16 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_17 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_18 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_19 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_20 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_21 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_22 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_23 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_24 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_25 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_26 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_27 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_28 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_29 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_30 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_31 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_32 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_33 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_34 | 1.0 | 0.0 | 1.0 |
| LDLOKCNF_35 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_36 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_37 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_38 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_39 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_40 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_41 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_42 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_43 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_44 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_45 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_46 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_47 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_48 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_49 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_50 | 1.0 | 0.0 | 1.0 |
| LDLOKCNF_51 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_52 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_53 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_54 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_55 | 1.0 | 0.0 | 1.0 |
| LDLOKCNF_56 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_57 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_58 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_59 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_60 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_61 | 1.0 | 0.0 | 1.0 |
| LDLOKCNF_62 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_63 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_64 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_65 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_66 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_67 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_68 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_69 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_70 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_71 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_72 | 0.0 | 1.0 | 0.0 |
| LDLOKCNF_73 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)