Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 1 | 5.10 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BKIGNCMG_21 | 3570 | 4433 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
| BKIGNCMG_21 | 2258 | 3394 | tet(X) | ARO:3000205 | tet(X) | 99.21 | 97.42 | M37699.1 |
| BKIGNCMG_21 | 920 | 2059 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BKIGNCMG_21 | 52 | 614 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.82 | 70.29 | M62487 |
| BKIGNCMG_21 | 2228 | 3394 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.74 | 100.00 | M37699 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BKIGNCMG_21 | 3570 | 4430 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| BKIGNCMG_27 | 30181 | 31086 | blaMUN-1 | MUN family extended-spectrum class A beta-lactamase MUN-1 | ALLELEX | 100.00 | 100.00 | WP_206340447.1 |
| BKIGNCMG_21 | 920 | 2056 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| BKIGNCMG_21 | 2228 | 3391 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| BKIGNCMG_21 | 24 | 614 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | PARTIALX | 96.46 | 74.44 | WP_063844771.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BKIGNCMG_3 | 6510 | 4930 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BKIGNCMG_1 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_2 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_3 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_4 | 1.0 | 0.0 | 1.0 |
| BKIGNCMG_5 | 1.0 | 0.0 | 1.0 |
| BKIGNCMG_6 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_7 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_8 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_9 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_10 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_11 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_12 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_14 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_15 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_16 | 1.0 | 0.0 | 1.0 |
| BKIGNCMG_17 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_18 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_19 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_20 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_21 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_22 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_23 | 1.0 | 0.0 | 1.0 |
| BKIGNCMG_24 | 1.0 | 0.0 | 1.0 |
| BKIGNCMG_25 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_26 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_27 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_28 | 1.0 | 0.0 | 1.0 |
| BKIGNCMG_29 | 1.0 | 0.0 | 1.0 |
| BKIGNCMG_30 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_31 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_32 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_33 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_34 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_35 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_36 | 1.0 | 0.0 | 1.0 |
| BKIGNCMG_37 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_38 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_39 | 1.0 | 0.0 | 1.0 |
| BKIGNCMG_40 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_41 | 1.0 | 0.0 | 1.0 |
| BKIGNCMG_42 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_43 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_44 | 1.0 | 0.0 | 1.0 |
| BKIGNCMG_45 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_46 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_47 | 1.0 | 0.0 | 1.0 |
| BKIGNCMG_48 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_49 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_50 | 1.0 | 0.0 | 1.0 |
| BKIGNCMG_51 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_52 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_53 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_54 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_55 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_56 | 1.0 | 0.0 | 1.0 |
| BKIGNCMG_57 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_58 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_59 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_60 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_61 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_62 | 0.0 | 1.0 | 0.0 |
| BKIGNCMG_63 | 1.0 | 0.0 | 1.0 |
| BKIGNCMG_64 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BKIGNCMG_6 | 4446 | 14197 | True | Unknown | VOG8336, |
| BKIGNCMG_62 | 7872 | 16867 | True | Siphoviridae | VOG2703, |
Phigaro v2.4.0 (Database: Jan. 2024 release)