Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CJMDCIDA_1 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_2 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_3 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_4 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_5 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_6 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_7 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_8 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_9 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_10 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_11 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_12 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_13 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_14 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_15 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_16 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_17 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_18 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_19 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_20 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_21 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_22 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_23 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_24 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_25 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_26 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_27 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_28 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_29 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_30 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_31 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_32 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_33 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_34 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_35 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_36 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_37 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_38 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_39 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_40 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_41 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_42 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_43 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_44 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_45 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_46 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_47 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_48 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_49 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_50 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_51 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_52 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_53 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_54 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_55 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_56 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_57 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_58 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_59 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_60 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_61 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_62 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_63 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_64 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_65 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_66 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_67 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_68 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_69 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_70 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_71 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_72 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_73 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_74 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_75 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_76 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_77 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_78 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_79 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_80 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_81 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_82 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_83 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_84 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_85 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_86 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_87 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_88 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_89 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_90 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_91 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_92 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_93 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_95 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_96 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_97 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_98 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_99 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_100 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_101 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_102 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_103 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_104 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_105 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_106 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_107 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_108 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_109 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_110 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_111 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_112 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_113 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_114 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_115 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_116 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_117 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_118 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_119 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_120 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_121 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_122 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_123 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_124 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_125 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_126 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_127 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_128 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_129 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_130 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_131 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_132 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_133 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_134 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_135 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_136 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_137 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_138 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_139 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_140 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_141 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_142 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_143 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_144 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_145 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_146 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_147 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_148 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_149 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_150 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_151 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_152 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_153 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_154 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_155 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_156 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_157 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_158 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_159 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_160 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_161 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_162 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_163 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_164 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_165 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_166 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_167 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_168 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_169 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_170 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_171 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_172 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_173 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_174 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_175 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_176 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_177 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_178 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_179 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_180 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_181 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_182 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_183 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_184 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_185 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_186 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_187 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_188 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_189 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_190 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_191 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_192 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_193 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_194 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_195 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_196 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_197 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_198 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_199 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_200 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_201 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_202 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_203 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_204 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_205 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_206 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_207 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_208 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_209 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_210 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_211 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_212 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_213 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_214 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_215 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_216 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_217 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_218 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_219 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_220 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_221 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_222 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_223 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_224 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_225 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_226 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_227 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_228 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_229 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_230 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_231 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_232 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_233 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_234 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_235 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_236 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_237 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_238 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_239 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_240 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_241 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_242 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_243 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_244 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_245 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_246 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_247 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_248 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_249 | 0.0 | 1.0 | 0.0 |
| CJMDCIDA_250 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_251 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_252 | 1.0 | 0.0 | 1.0 |
| CJMDCIDA_253 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CJMDCIDA_40 | 94193 | 104270 | False | Unknown | VOG8523, |
| CJMDCIDA_108 | 25211 | 34696 | False | Siphoviridae | VOG6280, |
Phigaro v2.4.0 (Database: Jan. 2024 release)