Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DNBOMMAD_57 | 77493 | 79073 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DNBOMMAD_1 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_2 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_3 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_4 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_5 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_6 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_7 | 1.0 | 0.0 | 1.0 |
| DNBOMMAD_8 | 1.0 | 0.0 | 1.0 |
| DNBOMMAD_9 | 1.0 | 0.0 | 1.0 |
| DNBOMMAD_10 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_11 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_12 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_13 | 1.0 | 0.0 | 1.0 |
| DNBOMMAD_14 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_15 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_16 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_17 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_18 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_19 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_21 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_22 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_23 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_24 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_25 | 1.0 | 0.0 | 1.0 |
| DNBOMMAD_26 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_27 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_28 | 1.0 | 0.0 | 1.0 |
| DNBOMMAD_29 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_30 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_31 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_32 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_33 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_34 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_35 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_36 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_37 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_38 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_39 | 1.0 | 0.0 | 1.0 |
| DNBOMMAD_40 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_41 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_42 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_43 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_44 | 1.0 | 0.0 | 1.0 |
| DNBOMMAD_45 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_46 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_47 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_48 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_49 | 1.0 | 0.0 | 1.0 |
| DNBOMMAD_50 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_51 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_52 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_53 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_54 | 1.0 | 0.0 | 1.0 |
| DNBOMMAD_55 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_56 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_57 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_58 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_59 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_60 | 1.0 | 0.0 | 1.0 |
| DNBOMMAD_61 | 1.0 | 0.0 | 1.0 |
| DNBOMMAD_62 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_63 | 1.0 | 0.0 | 1.0 |
| DNBOMMAD_64 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_65 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_66 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_67 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_68 | 1.0 | 0.0 | 1.0 |
| DNBOMMAD_69 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_70 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_71 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_72 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_73 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_75 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_76 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_77 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_78 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_79 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_80 | 1.0 | 0.0 | 1.0 |
| DNBOMMAD_81 | 1.0 | 0.0 | 1.0 |
| DNBOMMAD_82 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_83 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_84 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_85 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_86 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_87 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_88 | 1.0 | 0.0 | 1.0 |
| DNBOMMAD_89 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_90 | 1.0 | 0.0 | 1.0 |
| DNBOMMAD_91 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_92 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_93 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_94 | 0.0 | 1.0 | 0.0 |
| DNBOMMAD_95 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DNBOMMAD_18 | 2990 | 11212 | False | Siphoviridae | VOG8244, |
| DNBOMMAD_95 | 5335 | 9206 | False | Unknown | VOG0044, |
Phigaro v2.4.0 (Database: Jan. 2024 release)