Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ODOBOFKG_43 | 70259 | 71839 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ODOBOFKG_1 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_2 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_3 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_4 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_5 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_6 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_7 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_8 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_9 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_10 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_11 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_12 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_13 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_14 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_15 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_16 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_17 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_18 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_19 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_20 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_21 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_22 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_23 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_24 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_25 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_26 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_27 | 1.0 | 0.0 | 1.0 |
| ODOBOFKG_28 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_29 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_30 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_31 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_32 | 1.0 | 0.0 | 1.0 |
| ODOBOFKG_33 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_34 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_35 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_36 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_37 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_38 | 1.0 | 0.0 | 1.0 |
| ODOBOFKG_39 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_40 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_41 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_42 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_43 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_44 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_45 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_46 | 0.0 | 1.0 | 0.0 |
| ODOBOFKG_47 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ODOBOFKG_26 | 321287 | 349714 | False | Siphoviridae | VOG4599, |
| ODOBOFKG_46 | 60931 | 65118 | False | Myoviridae | VOG0189, |
Phigaro v2.4.0 (Database: Jan. 2024 release)