Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| PHNJNHAP_42 | 87147 | 88727 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.45 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PHNJNHAP_1 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_2 | 1.0 | 0.0 | 1.0 |
| PHNJNHAP_3 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_4 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_5 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_6 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_7 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_8 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_9 | 1.0 | 0.0 | 1.0 |
| PHNJNHAP_10 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_11 | 1.0 | 0.0 | 1.0 |
| PHNJNHAP_12 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_13 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_14 | 1.0 | 0.0 | 1.0 |
| PHNJNHAP_15 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_16 | 1.0 | 0.0 | 1.0 |
| PHNJNHAP_17 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_18 | 1.0 | 0.0 | 1.0 |
| PHNJNHAP_19 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_20 | 1.0 | 0.0 | 1.0 |
| PHNJNHAP_21 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_22 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_23 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_24 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_25 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_26 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_27 | 1.0 | 0.0 | 1.0 |
| PHNJNHAP_28 | 1.0 | 0.0 | 1.0 |
| PHNJNHAP_29 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_30 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_31 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_32 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_33 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_34 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_35 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_36 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_37 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_38 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_39 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_40 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_41 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_42 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_43 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_44 | 1.0 | 0.0 | 1.0 |
| PHNJNHAP_45 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_46 | 1.0 | 0.0 | 1.0 |
| PHNJNHAP_47 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_48 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_49 | 1.0 | 0.0 | 1.0 |
| PHNJNHAP_50 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_51 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_52 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_53 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_54 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_55 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_56 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_57 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_58 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_59 | 1.0 | 0.0 | 1.0 |
| PHNJNHAP_60 | 1.0 | 0.0 | 1.0 |
| PHNJNHAP_61 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_62 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_63 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_64 | 1.0 | 0.0 | 1.0 |
| PHNJNHAP_65 | 1.0 | 0.0 | 1.0 |
| PHNJNHAP_66 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_67 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_68 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_69 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_70 | 1.0 | 0.0 | 1.0 |
| PHNJNHAP_71 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_72 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_73 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_74 | 1.0 | 0.0 | 1.0 |
| PHNJNHAP_75 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_76 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_77 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_78 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_79 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_80 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_81 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_82 | 1.0 | 0.0 | 1.0 |
| PHNJNHAP_83 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_84 | 1.0 | 0.0 | 1.0 |
| PHNJNHAP_85 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_86 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_87 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_88 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_89 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_90 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_91 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_92 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_93 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_94 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_95 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_96 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_97 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_98 | 0.0 | 1.0 | 0.0 |
| PHNJNHAP_99 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PHNJNHAP_23 | 49684 | 55871 | False | Unknown | VOG10904, |
| PHNJNHAP_78 | 9877 | 20180 | False | Siphoviridae | VOG4751, |
| PHNJNHAP_87 | 149140 | 165477 | False | Unknown | VOG0298, |
Phigaro v2.4.0 (Database: Jan. 2024 release)