Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OHANCLJJ_36 | 165707 | 166609 | cepA | ARO:3003559 | cepA | 100.00 | 100.00 | U05883.1 |
| OHANCLJJ_2 | 913 | 2838 | tet(Q) | ARO:3000191 | tet(Q) | 97.04 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OHANCLJJ_2 | 913 | 2838 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | X58717 |
| OHANCLJJ_36 | 165707 | 166609 | cepA | Unknown Beta-lactam | 99.56 | 100.00 | FR688022 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OHANCLJJ_36 | 165707 | 166606 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005795628.1 |
| OHANCLJJ_2 | 916 | 2838 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | EXACTX | 100.00 | 100.00 | WP_004293868.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OHANCLJJ_1 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_2 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_3 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_4 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_5 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_6 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_7 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_8 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_9 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_10 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_11 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_12 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_13 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_14 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_15 | 1.0 | 0.0 | 1.0 |
| OHANCLJJ_16 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_17 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_18 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_19 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_20 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_21 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_22 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_23 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_24 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_25 | 1.0 | 0.0 | 1.0 |
| OHANCLJJ_26 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_27 | 1.0 | 0.0 | 1.0 |
| OHANCLJJ_28 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_29 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_30 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_31 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_32 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_33 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_34 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_35 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_36 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_37 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_38 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_39 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_40 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_41 | 1.0 | 0.0 | 1.0 |
| OHANCLJJ_42 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_43 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_44 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_45 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_46 | 1.0 | 0.0 | 1.0 |
| OHANCLJJ_47 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_48 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_49 | 1.0 | 0.0 | 1.0 |
| OHANCLJJ_50 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_51 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_52 | 0.0 | 1.0 | 0.0 |
| OHANCLJJ_53 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)