Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IEFIKGMA_25 | 13445 | 14347 | CepA-44 | ARO:3006225 | CepA-44 | 99.67 | 100.00 | NG_050386.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IEFIKGMA_25 | 13445 | 14347 | cepA-44 | Unknown Beta-lactam | 99.89 | 100.00 | U05885 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IEFIKGMA_25 | 13448 | 14347 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.67 | 100.00 | WP_032579291.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IEFIKGMA_1 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_2 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_3 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_4 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_5 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_6 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_7 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_8 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_9 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_10 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_11 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_12 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_13 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_14 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_15 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_16 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_17 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_18 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_19 | 1.0 | 0.0 | 1.0 |
| IEFIKGMA_20 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_21 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_22 | 1.0 | 0.0 | 1.0 |
| IEFIKGMA_23 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_24 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_25 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_26 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_27 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_28 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_29 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_30 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_31 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_32 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_33 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_34 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_35 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_36 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_37 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_38 | 1.0 | 0.0 | 1.0 |
| IEFIKGMA_39 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_40 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_41 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_42 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_43 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_44 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_45 | 1.0 | 0.0 | 1.0 |
| IEFIKGMA_46 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_47 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_48 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_49 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_50 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_51 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_52 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_53 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_54 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_55 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_56 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_57 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_58 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_59 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_60 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_61 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_62 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_63 | 0.0 | 1.0 | 0.0 |
| IEFIKGMA_64 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IEFIKGMA_55 | 61094 | 70841 | False | Unknown | VOG4572, |
Phigaro v2.4.0 (Database: Jan. 2024 release)