Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 1 | 0 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ADIJIICD_8 | 99263 | 100165 | cepA | ARO:3003559 | cepA | 99.67 | 100.00 | U05883.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ADIJIICD_8 | 99263 | 100165 | cepA | Unknown Beta-lactam | 99.89 | 100.00 | FR688022 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ADIJIICD_8 | 99263 | 100162 | cepA | CepA family extended-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005816369.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| ADIJIICD_4 | 99984 | 101177 | bft-2 | 0.0 | BFT B. fragilis toxin, subtype 2 | Exotoxin | 100.00 | 100.00 | BAA77277 |
| ADIJIICD_4 | 99984 | 101177 | bft-3 | 0.0 | BFT B. fragilis toxin, subtype 3 | Exotoxin | 96.90 | 100.00 | BAA77275 |
| ADIJIICD_4 | 99984 | 101177 | bft-1 | 0.0 | BFT B. fragilis toxin, subtype 1 | Exotoxin | 94.89 | 100.00 | BAA77276 |
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ADIJIICD_1 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_2 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_3 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_4 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_5 | 1.0 | 0.0 | 1.0 |
| ADIJIICD_6 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_7 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_8 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_9 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_10 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_11 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_12 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_13 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_14 | 1.0 | 0.0 | 1.0 |
| ADIJIICD_15 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_16 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_17 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_18 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_19 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_20 | 1.0 | 0.0 | 1.0 |
| ADIJIICD_21 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_22 | 1.0 | 0.0 | 1.0 |
| ADIJIICD_23 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_24 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_25 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_26 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_27 | 1.0 | 0.0 | 1.0 |
| ADIJIICD_28 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_29 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_30 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_31 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_32 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_33 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_34 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_35 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_36 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_37 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_38 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_39 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_40 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_41 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_42 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_43 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_44 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_45 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_46 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_47 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_48 | 1.0 | 0.0 | 1.0 |
| ADIJIICD_49 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_50 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_51 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_52 | 1.0 | 0.0 | 1.0 |
| ADIJIICD_53 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_54 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_55 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_56 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_57 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_58 | 1.0 | 0.0 | 1.0 |
| ADIJIICD_59 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_60 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_61 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_62 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_63 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_64 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_65 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_66 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_67 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_68 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_69 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_70 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_71 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_72 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_73 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_74 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_75 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_76 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_77 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_78 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_79 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_80 | 1.0 | 0.0 | 1.0 |
| ADIJIICD_81 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_82 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_83 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_84 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_85 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_86 | 1.0 | 0.0 | 1.0 |
| ADIJIICD_87 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_88 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_89 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_90 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_91 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_92 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_93 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_94 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_95 | 0.0 | 1.0 | 0.0 |
| ADIJIICD_96 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ADIJIICD_10 | 47544 | 60721 | False | Siphoviridae | VOG4581, |
Phigaro v2.4.0 (Database: Jan. 2024 release)