Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FCBAOOCH_45 | 56035 | 56831 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 91.59 | 99.50 | M17808 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FCBAOOCH_45 | 56035 | 56832 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 90.23 | 100.00 | WP_002682030.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FCBAOOCH_1 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_2 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_3 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_4 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_5 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_6 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_7 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_8 | 1.0 | 0.0 | 1.0 |
| FCBAOOCH_9 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_10 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_11 | 1.0 | 0.0 | 1.0 |
| FCBAOOCH_12 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_13 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_14 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_15 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_16 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_17 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_18 | 1.0 | 0.0 | 1.0 |
| FCBAOOCH_19 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_20 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_21 | 1.0 | 0.0 | 1.0 |
| FCBAOOCH_22 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_23 | 1.0 | 0.0 | 1.0 |
| FCBAOOCH_24 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_25 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_26 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_27 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_28 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_29 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_30 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_31 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_32 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_33 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_34 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_35 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_36 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_37 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_38 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_39 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_40 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_41 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_42 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_43 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_44 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_45 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_46 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_47 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_48 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_49 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_50 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_51 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_52 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_53 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_54 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_55 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_56 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_57 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_58 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_59 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_60 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_61 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_62 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_63 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_64 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_65 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_66 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_67 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_68 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_69 | 1.0 | 0.0 | 1.0 |
| FCBAOOCH_70 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_71 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_72 | 1.0 | 0.0 | 1.0 |
| FCBAOOCH_73 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_74 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_75 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_76 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_77 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_78 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_79 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_80 | 1.0 | 0.0 | 1.0 |
| FCBAOOCH_81 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_82 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_83 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_84 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_85 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_86 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_87 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_88 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_89 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_90 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_91 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_92 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_93 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_94 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_95 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_96 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_97 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_98 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_99 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_100 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_101 | 1.0 | 0.0 | 1.0 |
| FCBAOOCH_102 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_103 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_104 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_105 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_106 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_107 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_108 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_109 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_110 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_111 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_112 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_113 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_114 | 0.0 | 1.0 | 0.0 |
| FCBAOOCH_115 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FCBAOOCH_91 | 56237 | 65179 | False | Siphoviridae | VOG4841, |
| FCBAOOCH_94 | 73502 | 79449 | False | Myoviridae | VOG1931, |
Phigaro v2.4.0 (Database: Jan. 2024 release)