Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 1 | 2.24 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EDPLBAPP_9 | 100764 | 101969 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.25 | 100.00 | AF251288.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EDPLBAPP_9 | 100230 | 100739 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | BLASTX | 99.41 | 100.00 | WP_004308783.1 |
| EDPLBAPP_9 | 100767 | 101969 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.25 | 100.00 | WP_063853729.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EDPLBAPP_34 | 76245 | 77825 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EDPLBAPP_1 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_2 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_3 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_4 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_5 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_6 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_7 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_8 | 1.0 | 0.0 | 1.0 |
| EDPLBAPP_9 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_10 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_11 | 1.0 | 0.0 | 1.0 |
| EDPLBAPP_12 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_13 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_14 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_15 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_16 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_17 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_18 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_19 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_20 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_21 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_22 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_23 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_24 | 1.0 | 0.0 | 1.0 |
| EDPLBAPP_25 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_26 | 1.0 | 0.0 | 1.0 |
| EDPLBAPP_27 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_28 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_29 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_30 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_31 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_32 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_33 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_34 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_35 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_36 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_37 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_38 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_39 | 1.0 | 0.0 | 1.0 |
| EDPLBAPP_40 | 1.0 | 0.0 | 1.0 |
| EDPLBAPP_41 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_42 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_43 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_44 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_45 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_46 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_47 | 1.0 | 0.0 | 1.0 |
| EDPLBAPP_48 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_49 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_50 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_51 | 1.0 | 0.0 | 1.0 |
| EDPLBAPP_52 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_53 | 1.0 | 0.0 | 1.0 |
| EDPLBAPP_54 | 1.0 | 0.0 | 1.0 |
| EDPLBAPP_55 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_56 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_57 | 1.0 | 0.0 | 1.0 |
| EDPLBAPP_58 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_59 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_60 | 1.0 | 0.0 | 1.0 |
| EDPLBAPP_61 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_62 | 1.0 | 0.0 | 1.0 |
| EDPLBAPP_63 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_64 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_65 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_66 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_67 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_68 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_69 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_70 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_71 | 1.0 | 0.0 | 1.0 |
| EDPLBAPP_72 | 0.0 | 1.0 | 0.0 |
| EDPLBAPP_73 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EDPLBAPP_56 | 138389 | 144898 | False | Unknown | VOG6269, |
| EDPLBAPP_56 | 154751 | 165602 | False | Siphoviridae | VOG2154, |
Phigaro v2.4.0 (Database: Jan. 2024 release)