Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ACEKFGBF_48 | 179739 | 180641 | CepA-49 | ARO:3006226 | CepA-49 | 100.00 | 100.00 | NG_050387.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ACEKFGBF_48 | 179739 | 180641 | cepA-49 | Unknown Beta-lactam | 100.00 | 100.00 | U05886 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ACEKFGBF_48 | 179739 | 180638 | cepA-49 | extended-spectrum class A beta-lactamase CepA-49 | ALLELEX | 100.00 | 100.00 | WP_008659027.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ACEKFGBF_1 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_2 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_3 | 1.0 | 0.0 | 1.0 |
| ACEKFGBF_4 | 1.0 | 0.0 | 1.0 |
| ACEKFGBF_5 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_6 | 1.0 | 0.0 | 1.0 |
| ACEKFGBF_7 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_8 | 1.0 | 0.0 | 1.0 |
| ACEKFGBF_9 | 1.0 | 0.0 | 1.0 |
| ACEKFGBF_10 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_11 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_12 | 1.0 | 0.0 | 1.0 |
| ACEKFGBF_13 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_14 | 1.0 | 0.0 | 1.0 |
| ACEKFGBF_15 | 1.0 | 0.0 | 1.0 |
| ACEKFGBF_16 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_17 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_18 | 1.0 | 0.0 | 1.0 |
| ACEKFGBF_19 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_20 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_21 | 1.0 | 0.0 | 1.0 |
| ACEKFGBF_22 | 1.0 | 0.0 | 1.0 |
| ACEKFGBF_23 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_24 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_25 | 1.0 | 0.0 | 1.0 |
| ACEKFGBF_26 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_27 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_28 | 1.0 | 0.0 | 1.0 |
| ACEKFGBF_29 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_30 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_31 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_32 | 1.0 | 0.0 | 1.0 |
| ACEKFGBF_33 | 1.0 | 0.0 | 1.0 |
| ACEKFGBF_34 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_35 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_36 | 1.0 | 0.0 | 1.0 |
| ACEKFGBF_37 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_38 | 1.0 | 0.0 | 1.0 |
| ACEKFGBF_39 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_40 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_41 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_43 | 1.0 | 0.0 | 1.0 |
| ACEKFGBF_44 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_45 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_46 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_47 | 1.0 | 0.0 | 1.0 |
| ACEKFGBF_48 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_49 | 0.0 | 1.0 | 0.0 |
| ACEKFGBF_50 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ACEKFGBF_13 | 13348 | 22421 | False | Siphoviridae | VOG7238, |
Phigaro v2.4.0 (Database: Jan. 2024 release)