Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LLCILGCO_1 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_2 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_3 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_4 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_5 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_6 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_7 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_8 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_9 | 1.0 | 0.0 | 1.0 |
| LLCILGCO_10 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_11 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_12 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_13 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_14 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_15 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_16 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_17 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_18 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_19 | 1.0 | 0.0 | 1.0 |
| LLCILGCO_20 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_21 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_22 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_23 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_24 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_25 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_26 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_27 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_28 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_29 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_30 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_31 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_32 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_33 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_34 | 1.0 | 0.0 | 1.0 |
| LLCILGCO_35 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_36 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_37 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_38 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_39 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_40 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_41 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_42 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_43 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_44 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_45 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_46 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_47 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_48 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_49 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_50 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_51 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_52 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_53 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_54 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_55 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_56 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_57 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_58 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_59 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_60 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_61 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_62 | 1.0 | 0.0 | 1.0 |
| LLCILGCO_63 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_64 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_65 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_66 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_67 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_68 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_69 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_70 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_71 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_72 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_73 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_74 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_75 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_76 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_77 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_78 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_79 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_80 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_81 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_82 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_83 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_84 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_85 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_86 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_87 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_88 | 1.0 | 0.0 | 1.0 |
| LLCILGCO_89 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_90 | 1.0 | 0.0 | 1.0 |
| LLCILGCO_91 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_92 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_93 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_94 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_95 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_96 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_97 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_98 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_99 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_100 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_101 | 1.0 | 0.0 | 1.0 |
| LLCILGCO_102 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_103 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_104 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_105 | 1.0 | 0.0 | 1.0 |
| LLCILGCO_106 | 1.0 | 0.0 | 1.0 |
| LLCILGCO_107 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_108 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_109 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_110 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_111 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_112 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_113 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_114 | 1.0 | 0.0 | 1.0 |
| LLCILGCO_115 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_116 | 0.0 | 1.0 | 0.0 |
| LLCILGCO_117 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| LLCILGCO_52 | 315069 | 319671 | False | Unknown | VOG4568, |
| LLCILGCO_52 | 373519 | 391063 | False | Siphoviridae | VOG10608, |
Phigaro v2.4.0 (Database: Jan. 2024 release)