Probiotic potential risk score


ARGs VFs PGs PPRS
0000.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
No hit found

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
APAPDBKG_10.01.00.0
APAPDBKG_20.01.00.0
APAPDBKG_30.01.00.0
APAPDBKG_40.01.00.0
APAPDBKG_50.01.00.0
APAPDBKG_60.01.00.0
APAPDBKG_70.01.00.0
APAPDBKG_80.01.00.0
APAPDBKG_90.01.00.0
APAPDBKG_100.01.00.0
APAPDBKG_110.01.00.0
APAPDBKG_120.01.00.0
APAPDBKG_130.01.00.0
APAPDBKG_140.01.00.0
APAPDBKG_150.01.00.0
APAPDBKG_160.01.00.0
APAPDBKG_170.01.00.0
APAPDBKG_180.01.00.0
APAPDBKG_190.01.00.0
APAPDBKG_200.01.00.0
APAPDBKG_210.01.00.0
APAPDBKG_220.01.00.0
APAPDBKG_230.01.00.0
APAPDBKG_240.01.00.0
APAPDBKG_250.01.00.0
APAPDBKG_260.01.00.0
APAPDBKG_270.01.00.0
APAPDBKG_280.01.00.0
APAPDBKG_290.01.00.0
APAPDBKG_301.00.01.0
APAPDBKG_311.00.01.0
APAPDBKG_320.01.00.0
APAPDBKG_330.01.00.0
APAPDBKG_340.01.00.0
APAPDBKG_350.01.00.0
APAPDBKG_360.01.00.0
APAPDBKG_370.01.00.0
APAPDBKG_381.00.01.0
APAPDBKG_390.01.00.0
APAPDBKG_400.01.00.0
APAPDBKG_411.00.01.0
APAPDBKG_420.01.00.0
APAPDBKG_431.00.01.0
APAPDBKG_441.00.01.0
APAPDBKG_450.01.00.0
APAPDBKG_460.01.00.0
APAPDBKG_470.01.00.0
APAPDBKG_480.01.00.0
APAPDBKG_491.00.01.0
APAPDBKG_500.01.00.0
APAPDBKG_510.01.00.0
APAPDBKG_520.01.00.0
APAPDBKG_530.01.00.0
APAPDBKG_540.01.00.0
APAPDBKG_550.01.00.0
APAPDBKG_560.01.00.0
APAPDBKG_570.01.00.0
APAPDBKG_580.01.00.0
APAPDBKG_590.01.00.0
APAPDBKG_600.01.00.0
APAPDBKG_610.01.00.0
APAPDBKG_620.01.00.0
APAPDBKG_630.01.00.0
APAPDBKG_640.01.00.0
APAPDBKG_650.01.00.0
APAPDBKG_660.01.00.0
APAPDBKG_670.01.00.0
APAPDBKG_680.01.00.0
APAPDBKG_690.01.00.0
APAPDBKG_700.01.00.0
APAPDBKG_710.01.00.0
APAPDBKG_720.01.00.0
APAPDBKG_730.01.00.0
APAPDBKG_740.01.00.0
APAPDBKG_750.01.00.0
APAPDBKG_760.01.00.0
APAPDBKG_770.01.00.0
APAPDBKG_780.01.00.0
APAPDBKG_790.01.00.0
APAPDBKG_800.01.00.0
APAPDBKG_810.01.00.0
APAPDBKG_820.01.00.0
APAPDBKG_830.01.00.0
APAPDBKG_840.01.00.0
APAPDBKG_850.01.00.0
APAPDBKG_860.01.00.0
APAPDBKG_870.01.00.0
APAPDBKG_880.01.00.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
APAPDBKG_202061026698FalseUnknownVOG7407,

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements